(50 nodes) RNA Polymerase III Transcription network (Gorilla gorilla)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POU2F1	POU domain protein. (766 aa)
	BRF2	BRF2 RNA polymerase III transcription initiation factor subunit. (419 aa)
	POLR3GL	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (218 aa)
	TBP	TATA-box binding protein. (332 aa)
	GTF3C3	General transcription factor IIIC subunit 3. (888 aa)
	POLR3F	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
	G3R793_GORGO	HTH La-type RNA-binding domain-containing protein. (148 aa)
	G3R6M6_GORGO	RNA polymerase II subunit E. (210 aa)
	POLR2L	RNA polymerase II subunit L. (67 aa)
	GTF3C6	General transcription factor IIIC subunit 6. (213 aa)
	POLR3K	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
	GTF3A	General transcription factor IIIA. (409 aa)
	GTF3C4	General transcription factor IIIC subunit 4. (822 aa)
	BRF1	BRF1 RNA polymerase III transcription initiation factor subunit. (677 aa)
	POLR3D	RNA polymerase III subunit D. (398 aa)
	POLR3C	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
	POLR3H	RNA polymerase III subunit H. (230 aa)
	ENSGGOP00000048297	Nuclear factor I A. (170 aa)
	POLR3E	RNA polymerase III subunit E. (708 aa)
	POLR3G	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (223 aa)
	SNAPC4	Small nuclear RNA activating complex polypeptide 4. (1463 aa)
	CRCP	CGRP receptor component. (148 aa)
	POLR3B	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1133 aa)
	ENSGGOP00000042614	Zinc finger protein 143. (620 aa)
	POLR1C	RNA polymerase I and III subunit C. (350 aa)
	TBPL1	TATA-box binding protein like 1. (186 aa)
	ENSGGOP00000036704	Uncharacterized protein. (58 aa)
	ENSGGOP00000036689	RPOL9 domain-containing protein. (90 aa)
	BDP1	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB. (2624 aa)
	NFIX	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (495 aa)
	G3QK95_GORGO	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (125 aa)
	G3QKN8_GORGO	Chromosome 11 open reading frame 88. (196 aa)
	SNAPC5	Small nuclear RNA activating complex polypeptide 5. (98 aa)
	GTF3C2	General transcription factor IIIC subunit 2. (911 aa)
	SNAPC1	Small nuclear RNA activating complex polypeptide 1. (368 aa)
	POLR2F	RNA polymerase II subunit F. (158 aa)
	SNAPC3	Small nuclear RNA activating complex polypeptide 3. (412 aa)
	ENSGGOP00000034792	Uncharacterized protein. (55 aa)
	ENSGGOP00000034709	Uncharacterized protein. (192 aa)
	NFIB	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (570 aa)
	SSB	RRM_3 domain-containing protein. (245 aa)
	GTF3C5	General transcription factor IIIC subunit 5. (528 aa)
	SNAPC2	Small nuclear RNA activating complex polypeptide 2. (334 aa)
	POLR3A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1387 aa)
	NFIC	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (540 aa)
	POLR2K	RNA polymerase II subunit K. (58 aa)
	NFIA	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (554 aa)
	G3RM55_GORGO	HTH La-type RNA-binding domain-containing protein. (368 aa)
	GTF3C1	General transcription factor IIIC subunit 1. (2081 aa)
	ZNF76	Zinc finger protein 76. (570 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP1	BRF1	ENSGGOP00000000512	ENSGGOP00000007455	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	BRF1 RNA polymerase III transcription initiation factor subunit.	0.993
BDP1	BRF2	ENSGGOP00000000512	ENSGGOP00000012574	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	BRF2 RNA polymerase III transcription initiation factor subunit.	0.994
BDP1	CRCP	ENSGGOP00000000512	ENSGGOP00000044844	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	CGRP receptor component.	0.915
BDP1	ENSGGOP00000034709	ENSGGOP00000000512	ENSGGOP00000034709	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	Uncharacterized protein.	0.776
BDP1	ENSGGOP00000034792	ENSGGOP00000000512	ENSGGOP00000034792	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	Uncharacterized protein.	0.792
BDP1	ENSGGOP00000036689	ENSGGOP00000000512	ENSGGOP00000036689	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	RPOL9 domain-containing protein.	0.801
BDP1	ENSGGOP00000036704	ENSGGOP00000000512	ENSGGOP00000036704	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	Uncharacterized protein.	0.748
BDP1	ENSGGOP00000042614	ENSGGOP00000000512	ENSGGOP00000042614	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	Zinc finger protein 143.	0.501
BDP1	G3QK95_GORGO	ENSGGOP00000000512	ENSGGOP00000002866	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.878
BDP1	G3QKN8_GORGO	ENSGGOP00000000512	ENSGGOP00000003018	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	Chromosome 11 open reading frame 88.	0.864
BDP1	G3R6M6_GORGO	ENSGGOP00000000512	ENSGGOP00000010988	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	RNA polymerase II subunit E.	0.831
BDP1	GTF3A	ENSGGOP00000000512	ENSGGOP00000008214	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIA.	0.838
BDP1	GTF3C1	ENSGGOP00000000512	ENSGGOP00000016274	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIC subunit 1.	0.987
BDP1	GTF3C2	ENSGGOP00000000512	ENSGGOP00000004654	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIC subunit 2.	0.818
BDP1	GTF3C3	ENSGGOP00000000512	ENSGGOP00000011505	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIC subunit 3.	0.953
BDP1	GTF3C4	ENSGGOP00000000512	ENSGGOP00000008136	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIC subunit 4.	0.836
BDP1	GTF3C5	ENSGGOP00000000512	ENSGGOP00000024719	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIC subunit 5.	0.902
BDP1	GTF3C6	ENSGGOP00000000512	ENSGGOP00000010418	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	General transcription factor IIIC subunit 6.	0.736
BDP1	POLR1C	ENSGGOP00000000512	ENSGGOP00000039774	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	RNA polymerase I and III subunit C.	0.902
BDP1	POLR2F	ENSGGOP00000000512	ENSGGOP00000005108	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.	RNA polymerase II subunit F.	0.878