(17 nodes) Nuclear exosome (RNase complex), and snRNA catabolic process network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DIS3L	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1058 aa)
	EXOSC5	Exosome component 5. (235 aa)
	EXOSC8	Exosome component 8. (276 aa)
	RBM7	RNA binding motif protein 7. (267 aa)
	EXOSC3	Exosome component 3. (275 aa)
	EXOSC2	Exosome component 2. (293 aa)
	EXOSC4	Exosome component 4. (245 aa)
	C1D	Uncharacterized protein. (180 aa)
	EXOSC10	Exosome component 10. (890 aa)
	MTREX	Mtr4 exosome RNA helicase. (1042 aa)
	EXOSC1	Exosome component 1. (197 aa)
	ENSPPAP00000034481	Uncharacterized protein. (174 aa)
	MPHOSPH6	M-phase phosphoprotein 6. (152 aa)
	DIS3	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (958 aa)
	EXOSC7	Exosome component 7. (291 aa)
	EXOSC9	Exosome component 9. (456 aa)
	ZCCHC8	CCHC-type domain-containing protein. (707 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1D	DIS3	ENSPPAP00000029681	ENSPPAP00000038153	Uncharacterized protein.	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.824
C1D	DIS3L	ENSPPAP00000029681	ENSPPAP00000004774	Uncharacterized protein.	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.701
C1D	EXOSC1	ENSPPAP00000029681	ENSPPAP00000033973	Uncharacterized protein.	Exosome component 1.	0.971
C1D	EXOSC10	ENSPPAP00000029681	ENSPPAP00000030845	Uncharacterized protein.	Exosome component 10.	0.997
C1D	EXOSC2	ENSPPAP00000029681	ENSPPAP00000023252	Uncharacterized protein.	Exosome component 2.	0.955
C1D	EXOSC3	ENSPPAP00000029681	ENSPPAP00000013434	Uncharacterized protein.	Exosome component 3.	0.964
C1D	EXOSC4	ENSPPAP00000029681	ENSPPAP00000025237	Uncharacterized protein.	Exosome component 4.	0.934
C1D	EXOSC5	ENSPPAP00000029681	ENSPPAP00000006047	Uncharacterized protein.	Exosome component 5.	0.973
C1D	EXOSC7	ENSPPAP00000029681	ENSPPAP00000041919	Uncharacterized protein.	Exosome component 7.	0.960
C1D	EXOSC8	ENSPPAP00000029681	ENSPPAP00000008070	Uncharacterized protein.	Exosome component 8.	0.962
C1D	EXOSC9	ENSPPAP00000029681	ENSPPAP00000042613	Uncharacterized protein.	Exosome component 9.	0.962
C1D	MPHOSPH6	ENSPPAP00000029681	ENSPPAP00000036148	Uncharacterized protein.	M-phase phosphoprotein 6.	0.988
C1D	MTREX	ENSPPAP00000029681	ENSPPAP00000032989	Uncharacterized protein.	Mtr4 exosome RNA helicase.	0.966
C1D	RBM7	ENSPPAP00000029681	ENSPPAP00000008658	Uncharacterized protein.	RNA binding motif protein 7.	0.837
C1D	ZCCHC8	ENSPPAP00000029681	ENSPPAP00000043133	Uncharacterized protein.	CCHC-type domain-containing protein.	0.719
DIS3	C1D	ENSPPAP00000038153	ENSPPAP00000029681	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.824
DIS3	DIS3L	ENSPPAP00000038153	ENSPPAP00000004774	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	0.685
DIS3	ENSPPAP00000034481	ENSPPAP00000038153	ENSPPAP00000034481	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.648
DIS3	EXOSC1	ENSPPAP00000038153	ENSPPAP00000033973	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 1.	0.999
DIS3	EXOSC10	ENSPPAP00000038153	ENSPPAP00000030845	DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.	Exosome component 10.	0.999