(6 nodes) Mixed, incl. Major facilitator superfamily associated domain, and VWA N-terminal network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TAX1BP3	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites. (124 aa)
	CACHD1	Cache domain containing 1. (1274 aa)
	MFSD6L	Major facilitator superfamily domain containing 6 like. (586 aa)
	S100A5	Protein S100; Belongs to the S-100 family. (92 aa)
	ZNF841	Zinc finger protein 841. (924 aa)
	ZMYM6	Zinc finger MYM-type containing 6. (1325 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CACHD1	MFSD6L	ENSPPAP00000003048	ENSPPAP00000004341	Cache domain containing 1.	Major facilitator superfamily domain containing 6 like.	0.699
CACHD1	S100A5	ENSPPAP00000003048	ENSPPAP00000013694	Cache domain containing 1.	Protein S100; Belongs to the S-100 family.	0.650
CACHD1	TAX1BP3	ENSPPAP00000003048	ENSPPAP00000000953	Cache domain containing 1.	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites.	0.691
CACHD1	ZMYM6	ENSPPAP00000003048	ENSPPAP00000018092	Cache domain containing 1.	Zinc finger MYM-type containing 6.	0.691
CACHD1	ZNF841	ENSPPAP00000003048	ENSPPAP00000014743	Cache domain containing 1.	Zinc finger protein 841.	0.692
MFSD6L	CACHD1	ENSPPAP00000004341	ENSPPAP00000003048	Major facilitator superfamily domain containing 6 like.	Cache domain containing 1.	0.699
MFSD6L	S100A5	ENSPPAP00000004341	ENSPPAP00000013694	Major facilitator superfamily domain containing 6 like.	Protein S100; Belongs to the S-100 family.	0.654
MFSD6L	TAX1BP3	ENSPPAP00000004341	ENSPPAP00000000953	Major facilitator superfamily domain containing 6 like.	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites.	0.692
S100A5	CACHD1	ENSPPAP00000013694	ENSPPAP00000003048	Protein S100; Belongs to the S-100 family.	Cache domain containing 1.	0.650
S100A5	MFSD6L	ENSPPAP00000013694	ENSPPAP00000004341	Protein S100; Belongs to the S-100 family.	Major facilitator superfamily domain containing 6 like.	0.654
S100A5	TAX1BP3	ENSPPAP00000013694	ENSPPAP00000000953	Protein S100; Belongs to the S-100 family.	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites.	0.654
TAX1BP3	CACHD1	ENSPPAP00000000953	ENSPPAP00000003048	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites.	Cache domain containing 1.	0.691
TAX1BP3	MFSD6L	ENSPPAP00000000953	ENSPPAP00000004341	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites.	Major facilitator superfamily domain containing 6 like.	0.692
TAX1BP3	S100A5	ENSPPAP00000000953	ENSPPAP00000013694	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites.	Protein S100; Belongs to the S-100 family.	0.654
ZMYM6	CACHD1	ENSPPAP00000018092	ENSPPAP00000003048	Zinc finger MYM-type containing 6.	Cache domain containing 1.	0.691
ZMYM6	ZNF841	ENSPPAP00000018092	ENSPPAP00000014743	Zinc finger MYM-type containing 6.	Zinc finger protein 841.	0.733
ZNF841	CACHD1	ENSPPAP00000014743	ENSPPAP00000003048	Zinc finger protein 841.	Cache domain containing 1.	0.692
ZNF841	ZMYM6	ENSPPAP00000014743	ENSPPAP00000018092	Zinc finger protein 841.	Zinc finger MYM-type containing 6.	0.733