(15 nodes) Mixed, incl. Egg activation, and FAM209 family network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PKDREJ	Polycystin family receptor for egg jelly. (2164 aa)
	ESX1	Homeobox domain-containing protein. (413 aa)
	SPATA16	Spermatogenesis associated 16. (581 aa)
	SLC9B1	Solute carrier family 9 member B1. (512 aa)
	FAM209A	Family with sequence similarity 209 member A. (170 aa)
	PLCZ1	Phosphoinositide phospholipase C. (639 aa)
	TMCO5A	Uncharacterized protein. (190 aa)
	MAGEB16	MAGE family member B16. (356 aa)
	C9orf131	Chromosome 9 open reading frame 131. (1078 aa)
	DMRT1	Doublesex and mab-3 related transcription factor 1. (371 aa)
	FAM71D	Family with sequence similarity 71 member D. (422 aa)
	TULP2	TUB like protein 2; Belongs to the TUB family. (500 aa)
	WBP2NL	WBP2 N-terminal like. (302 aa)
	C9orf43	Chromosome 9 open reading frame 43. (460 aa)
	C12orf40	Chromosome 12 open reading frame 40. (652 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C12orf40	C9orf131	ENSPPAP00000042998	ENSPPAP00000027346	Chromosome 12 open reading frame 40.	Chromosome 9 open reading frame 131.	0.834
C12orf40	C9orf43	ENSPPAP00000042998	ENSPPAP00000035549	Chromosome 12 open reading frame 40.	Chromosome 9 open reading frame 43.	0.713
C12orf40	ESX1	ENSPPAP00000042998	ENSPPAP00000006484	Chromosome 12 open reading frame 40.	Homeobox domain-containing protein.	0.700
C12orf40	FAM209A	ENSPPAP00000042998	ENSPPAP00000018984	Chromosome 12 open reading frame 40.	Family with sequence similarity 209 member A.	0.672
C12orf40	FAM71D	ENSPPAP00000042998	ENSPPAP00000028927	Chromosome 12 open reading frame 40.	Family with sequence similarity 71 member D.	0.464
C12orf40	MAGEB16	ENSPPAP00000042998	ENSPPAP00000026517	Chromosome 12 open reading frame 40.	MAGE family member B16.	0.675
C12orf40	PKDREJ	ENSPPAP00000042998	ENSPPAP00000003811	Chromosome 12 open reading frame 40.	Polycystin family receptor for egg jelly.	0.695
C12orf40	PLCZ1	ENSPPAP00000042998	ENSPPAP00000020092	Chromosome 12 open reading frame 40.	Phosphoinositide phospholipase C.	0.626
C12orf40	SLC9B1	ENSPPAP00000042998	ENSPPAP00000012599	Chromosome 12 open reading frame 40.	Solute carrier family 9 member B1.	0.536
C12orf40	SPATA16	ENSPPAP00000042998	ENSPPAP00000007666	Chromosome 12 open reading frame 40.	Spermatogenesis associated 16.	0.742
C12orf40	TMCO5A	ENSPPAP00000042998	ENSPPAP00000021163	Chromosome 12 open reading frame 40.	Uncharacterized protein.	0.794
C12orf40	TULP2	ENSPPAP00000042998	ENSPPAP00000031321	Chromosome 12 open reading frame 40.	TUB like protein 2; Belongs to the TUB family.	0.703
C12orf40	WBP2NL	ENSPPAP00000042998	ENSPPAP00000031519	Chromosome 12 open reading frame 40.	WBP2 N-terminal like.	0.592
C9orf131	C12orf40	ENSPPAP00000027346	ENSPPAP00000042998	Chromosome 9 open reading frame 131.	Chromosome 12 open reading frame 40.	0.834
C9orf131	C9orf43	ENSPPAP00000027346	ENSPPAP00000035549	Chromosome 9 open reading frame 131.	Chromosome 9 open reading frame 43.	0.834
C9orf131	ESX1	ENSPPAP00000027346	ENSPPAP00000006484	Chromosome 9 open reading frame 131.	Homeobox domain-containing protein.	0.700
C9orf131	FAM209A	ENSPPAP00000027346	ENSPPAP00000018984	Chromosome 9 open reading frame 131.	Family with sequence similarity 209 member A.	0.672
C9orf131	FAM71D	ENSPPAP00000027346	ENSPPAP00000028927	Chromosome 9 open reading frame 131.	Family with sequence similarity 71 member D.	0.646
C9orf131	MAGEB16	ENSPPAP00000027346	ENSPPAP00000026517	Chromosome 9 open reading frame 131.	MAGE family member B16.	0.703
C9orf131	PKDREJ	ENSPPAP00000027346	ENSPPAP00000003811	Chromosome 9 open reading frame 131.	Polycystin family receptor for egg jelly.	0.781