15 items (Pan paniscus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CNOT3	CCR4-NOT transcription complex subunit 3. (753 aa)
	TOB1	Transducer of ERBB2, 1. (345 aa)
	CNOT1	CCR4-NOT transcription complex subunit 1. (2383 aa)
	CNOT10	CCR4-NOT transcription complex subunit 10. (804 aa)
	ENSPPAP00000009956	Uncharacterized protein. (245 aa)
	CNOT6L	CCR4-NOT transcription complex subunit 6 like. (548 aa)
	CNOT6	CCR4-NOT transcription complex subunit 6. (557 aa)
	CNOT11	CCR4-NOT transcription complex subunit 11. (434 aa)
	ENSPPAP00000022078	Endo/exonuclease/phosphatase domain-containing protein. (470 aa)
	CNOT7	CCR4-NOT transcription complex subunit 7. (285 aa)
	CNOT9	CCR4-NOT transcription complex subunit 9. (331 aa)
	ENSPPAP00000036339	Uncharacterized protein. (244 aa)
	CNOT4	CCR4-NOT transcription complex subunit 4. (712 aa)
	CNOT2	CCR4-NOT transcription complex subunit 2. (550 aa)
	CNOT8	CCR4-NOT transcription complex subunit 8. (292 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNOT1	CNOT10	ENSPPAP00000005518	ENSPPAP00000007869	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 10.	0.997
CNOT1	CNOT11	ENSPPAP00000005518	ENSPPAP00000019803	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 11.	0.997
CNOT1	CNOT2	ENSPPAP00000005518	ENSPPAP00000039832	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 2.	0.999
CNOT1	CNOT3	ENSPPAP00000005518	ENSPPAP00000000824	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 3.	0.999
CNOT1	CNOT4	ENSPPAP00000005518	ENSPPAP00000038531	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 4.	0.997
CNOT1	CNOT6	ENSPPAP00000005518	ENSPPAP00000018255	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 6.	0.980
CNOT1	CNOT6L	ENSPPAP00000005518	ENSPPAP00000014122	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 6 like.	0.971
CNOT1	CNOT7	ENSPPAP00000005518	ENSPPAP00000028144	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 7.	0.975
CNOT1	CNOT8	ENSPPAP00000005518	ENSPPAP00000042181	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 8.	0.992
CNOT1	CNOT9	ENSPPAP00000005518	ENSPPAP00000028310	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 9.	0.998
CNOT1	ENSPPAP00000009956	ENSPPAP00000005518	ENSPPAP00000009956	CCR4-NOT transcription complex subunit 1.	Uncharacterized protein.	0.975
CNOT1	ENSPPAP00000022078	ENSPPAP00000005518	ENSPPAP00000022078	CCR4-NOT transcription complex subunit 1.	Endo/exonuclease/phosphatase domain-containing protein.	0.971
CNOT1	ENSPPAP00000036339	ENSPPAP00000005518	ENSPPAP00000036339	CCR4-NOT transcription complex subunit 1.	Uncharacterized protein.	0.975
CNOT1	TOB1	ENSPPAP00000005518	ENSPPAP00000002817	CCR4-NOT transcription complex subunit 1.	Transducer of ERBB2, 1.	0.881
CNOT10	CNOT1	ENSPPAP00000007869	ENSPPAP00000005518	CCR4-NOT transcription complex subunit 10.	CCR4-NOT transcription complex subunit 1.	0.997
CNOT10	CNOT11	ENSPPAP00000007869	ENSPPAP00000019803	CCR4-NOT transcription complex subunit 10.	CCR4-NOT transcription complex subunit 11.	0.997
CNOT10	CNOT2	ENSPPAP00000007869	ENSPPAP00000039832	CCR4-NOT transcription complex subunit 10.	CCR4-NOT transcription complex subunit 2.	0.996
CNOT10	CNOT3	ENSPPAP00000007869	ENSPPAP00000000824	CCR4-NOT transcription complex subunit 10.	CCR4-NOT transcription complex subunit 3.	0.988
CNOT10	CNOT4	ENSPPAP00000007869	ENSPPAP00000038531	CCR4-NOT transcription complex subunit 10.	CCR4-NOT transcription complex subunit 4.	0.960
CNOT10	CNOT6	ENSPPAP00000007869	ENSPPAP00000018255	CCR4-NOT transcription complex subunit 10.	CCR4-NOT transcription complex subunit 6.	0.969