STRINGSTRING
SOX17 SOX17 GATA6 GATA6 PAF1 PAF1 RTF1 RTF1 EOMES EOMES CDC73 CDC73 CTNNB1 CTNNB1 CTR9 CTR9 LEO1 LEO1 SOX2 SOX2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SOX17SRY-box transcription factor 17. (428 aa)
GATA6Uncharacterized protein. (402 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (533 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (667 aa)
EOMESEomesodermin. (680 aa)
CDC73Cell division cycle 73. (531 aa)
CTNNB1Catenin beta 1. (781 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
SOX2SRY-box transcription factor 2. (299 aa)
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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