STRINGSTRING
OGFOD2 OGFOD2 VPS33B VPS33B LOC100981320 LOC100981320 JMJD6 JMJD6 FKBP10 FKBP10 PLOD1 PLOD1 VIPAS39 VIPAS39 P3H3 P3H3 PLOD3 PLOD3 PLOD2 PLOD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OGFOD22-oxoglutarate and iron dependent oxygenase domain containing 2. (350 aa)
VPS33BUncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (617 aa)
LOC100981320Uncharacterized protein. (231 aa)
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (420 aa)
FKBP10Peptidylprolyl isomerase. (576 aa)
PLOD1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (737 aa)
VIPAS39VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. (519 aa)
P3H3Prolyl 3-hydroxylase 3. (647 aa)
PLOD3Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (738 aa)
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. (758 aa)
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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