(26 nodes) Viral protein processing network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CSNK1A1	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily. (365 aa)
	ENSPPAP00000042728	Uncharacterized protein. (325 aa)
	PARP9	Poly(ADP-ribose) polymerase family member 9. (855 aa)
	MGAT1	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase. (445 aa)
	MOGS	Mannosyl-oligosaccharide glucosidase. (837 aa)
	GALNT1	Polypeptide N-acetylgalactosaminyltransferase. (559 aa)
	ST6GALNAC3	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3; Belongs to the glycosyltransferase 29 family. (305 aa)
	PARP16	Poly [ADP-ribose] polymerase. (323 aa)
	ENSPPAP00000017361	Uncharacterized protein. (81 aa)
	MGAT4C	MGAT4 family member C. (478 aa)
	ST6GALNAC2	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (374 aa)
	MGAT5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. (741 aa)
	ST6GAL1	ST6 beta-galactoside alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family. (406 aa)
	MGAT4B	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B. (575 aa)
	CANX	Calnexin. (592 aa)
	SPCS1	Signal peptidase complex subunit 1. (169 aa)
	FURIN	Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family. (794 aa)
	PRMT1	Protein arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (371 aa)
	EDEM2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (578 aa)
	SPCS3	Signal peptidase complex subunit 3. (155 aa)
	GSK3A	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily. (463 aa)
	MAN2A1	Alpha-mannosidase. (1144 aa)
	MAN1B1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (699 aa)
	ENSPPAP00000033311	Protein kinase domain-containing protein. (305 aa)
	ST6GALNAC4	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4; Belongs to the glycosyltransferase 29 family. (302 aa)
	PARP10	Poly [ADP-ribose] polymerase. (1037 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CANX	EDEM2	ENSPPAP00000021763	ENSPPAP00000025203	Calnexin.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.731
CANX	MAN1B1	ENSPPAP00000021763	ENSPPAP00000032455	Calnexin.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.544
CANX	MOGS	ENSPPAP00000021763	ENSPPAP00000005075	Calnexin.	Mannosyl-oligosaccharide glucosidase.	0.795
CSNK1A1	GSK3A	ENSPPAP00000036932	ENSPPAP00000027110	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.	0.571
EDEM2	CANX	ENSPPAP00000025203	ENSPPAP00000021763	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Calnexin.	0.731
EDEM2	MAN2A1	ENSPPAP00000025203	ENSPPAP00000029892	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Alpha-mannosidase.	0.640
ENSPPAP00000017361	GSK3A	ENSPPAP00000017361	ENSPPAP00000027110	Uncharacterized protein.	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.	0.571
ENSPPAP00000033311	GSK3A	ENSPPAP00000033311	ENSPPAP00000027110	Protein kinase domain-containing protein.	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.	0.571
GSK3A	CSNK1A1	ENSPPAP00000027110	ENSPPAP00000036932	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	0.571
GSK3A	ENSPPAP00000017361	ENSPPAP00000027110	ENSPPAP00000017361	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.571
GSK3A	ENSPPAP00000033311	ENSPPAP00000027110	ENSPPAP00000033311	Glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.571
MAN1B1	CANX	ENSPPAP00000032455	ENSPPAP00000021763	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Calnexin.	0.544
MAN1B1	MAN2A1	ENSPPAP00000032455	ENSPPAP00000029892	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Alpha-mannosidase.	0.691
MAN1B1	MOGS	ENSPPAP00000032455	ENSPPAP00000005075	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Mannosyl-oligosaccharide glucosidase.	0.608
MAN2A1	EDEM2	ENSPPAP00000029892	ENSPPAP00000025203	Alpha-mannosidase.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.640
MAN2A1	MAN1B1	ENSPPAP00000029892	ENSPPAP00000032455	Alpha-mannosidase.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.691
MAN2A1	MGAT1	ENSPPAP00000029892	ENSPPAP00000001340	Alpha-mannosidase.	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.	0.955
MAN2A1	MGAT5	ENSPPAP00000029892	ENSPPAP00000018841	Alpha-mannosidase.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.	0.472
MGAT1	MAN2A1	ENSPPAP00000001340	ENSPPAP00000029892	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.	Alpha-mannosidase.	0.955
MGAT1	MGAT4B	ENSPPAP00000001340	ENSPPAP00000020483	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.	0.463