(12 nodes) Negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay network (Pan paniscus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	DHX34	DExH-box helicase 34. (1128 aa)
	A1CF	APOBEC1 complementation factor. (602 aa)
	ENSPPAP00000037600	Uncharacterized protein. (248 aa)
	LOC100984823	Uncharacterized protein. (543 aa)
	PABPC1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (645 aa)
	SECISBP2	SECIS binding protein 2. (855 aa)
	APOBEC1	Apolipoprotein B mRNA editing enzyme catalytic subunit 1. (218 aa)
	HNRNPAB	RRM domain-containing protein. (187 aa)
	LOC100992462	Uncharacterized protein. (519 aa)
	ENSPPAP00000026406	RRM domain-containing protein. (537 aa)
	SYNCRIP	Uncharacterized protein. (561 aa)
	NBAS	Neuroblastoma amplified sequence. (2371 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1CF	APOBEC1	ENSPPAP00000009788	ENSPPAP00000008823	APOBEC1 complementation factor.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.950
APOBEC1	A1CF	ENSPPAP00000008823	ENSPPAP00000009788	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	APOBEC1 complementation factor.	0.950
APOBEC1	HNRNPAB	ENSPPAP00000008823	ENSPPAP00000029013	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	RRM domain-containing protein.	0.497
APOBEC1	SYNCRIP	ENSPPAP00000008823	ENSPPAP00000021462	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	Uncharacterized protein.	0.414
DHX34	LOC100992462	ENSPPAP00000012838	ENSPPAP00000027355	DExH-box helicase 34.	Uncharacterized protein.	0.559
DHX34	PABPC1	ENSPPAP00000012838	ENSPPAP00000029188	DExH-box helicase 34.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.596
ENSPPAP00000026406	ENSPPAP00000037600	ENSPPAP00000026406	ENSPPAP00000037600	RRM domain-containing protein.	Uncharacterized protein.	0.459
ENSPPAP00000026406	HNRNPAB	ENSPPAP00000026406	ENSPPAP00000029013	RRM domain-containing protein.	RRM domain-containing protein.	0.612
ENSPPAP00000026406	LOC100992462	ENSPPAP00000026406	ENSPPAP00000027355	RRM domain-containing protein.	Uncharacterized protein.	0.532
ENSPPAP00000037600	ENSPPAP00000026406	ENSPPAP00000037600	ENSPPAP00000026406	Uncharacterized protein.	RRM domain-containing protein.	0.459
ENSPPAP00000037600	SYNCRIP	ENSPPAP00000037600	ENSPPAP00000021462	Uncharacterized protein.	Uncharacterized protein.	0.459
HNRNPAB	APOBEC1	ENSPPAP00000029013	ENSPPAP00000008823	RRM domain-containing protein.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.497
HNRNPAB	ENSPPAP00000026406	ENSPPAP00000029013	ENSPPAP00000026406	RRM domain-containing protein.	RRM domain-containing protein.	0.612
HNRNPAB	SYNCRIP	ENSPPAP00000029013	ENSPPAP00000021462	RRM domain-containing protein.	Uncharacterized protein.	0.659
LOC100992462	DHX34	ENSPPAP00000027355	ENSPPAP00000012838	Uncharacterized protein.	DExH-box helicase 34.	0.559
LOC100992462	ENSPPAP00000026406	ENSPPAP00000027355	ENSPPAP00000026406	Uncharacterized protein.	RRM domain-containing protein.	0.532
LOC100992462	SYNCRIP	ENSPPAP00000027355	ENSPPAP00000021462	Uncharacterized protein.	Uncharacterized protein.	0.532
PABPC1	DHX34	ENSPPAP00000029188	ENSPPAP00000012838	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	DExH-box helicase 34.	0.596
SYNCRIP	APOBEC1	ENSPPAP00000021462	ENSPPAP00000008823	Uncharacterized protein.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.414
SYNCRIP	ENSPPAP00000037600	ENSPPAP00000021462	ENSPPAP00000037600	Uncharacterized protein.	Uncharacterized protein.	0.459