18 items (Pan paniscus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EPHB1	EPH receptor B1. (984 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator like. (628 aa)
	SIX4	SIX homeobox 4. (775 aa)
	CYP26B1	Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family. (495 aa)
	KLHL41	Kelch like family member 41. (606 aa)
	TBX1	Uncharacterized protein. (447 aa)
	AKIRIN1	Akirin 1. (191 aa)
	NR1D2	Nuclear receptor subfamily 1 group D member 2. (580 aa)
	MSTN	Growth/differentiation factor 8; Acts specifically as a negative regulator of skeletal muscle growth; Belongs to the TGF-beta family. (376 aa)
	RBFOX1	RRM domain-containing protein. (582 aa)
	GPC1	Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (636 aa)
	RBM24	Uncharacterized protein. (178 aa)
	MEF2C	Myocyte enhancer factor 2C. (482 aa)
	UQCC2	Ubiquinol-cytochrome c reductase complex assembly factor 2. (126 aa)
	MYOCD	Myocardin. (986 aa)
	DDX5	DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
	DDX17	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (735 aa)
	NLN	Neurolysin. (704 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL	NR1D2	ENSPPAP00000003288	ENSPPAP00000020813	Aryl hydrocarbon receptor nuclear translocator like.	Nuclear receptor subfamily 1 group D member 2.	0.801
DDX17	DDX5	ENSPPAP00000039269	ENSPPAP00000038628	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.961
DDX5	DDX17	ENSPPAP00000038628	ENSPPAP00000039269	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	0.961
DDX5	MYOCD	ENSPPAP00000038628	ENSPPAP00000036246	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Myocardin.	0.472
MEF2C	MSTN	ENSPPAP00000033228	ENSPPAP00000024996	Myocyte enhancer factor 2C.	Growth/differentiation factor 8; Acts specifically as a negative regulator of skeletal muscle growth; Belongs to the TGF-beta family.	0.479
MEF2C	MYOCD	ENSPPAP00000033228	ENSPPAP00000036246	Myocyte enhancer factor 2C.	Myocardin.	0.698
MSTN	MEF2C	ENSPPAP00000024996	ENSPPAP00000033228	Growth/differentiation factor 8; Acts specifically as a negative regulator of skeletal muscle growth; Belongs to the TGF-beta family.	Myocyte enhancer factor 2C.	0.479
MYOCD	DDX5	ENSPPAP00000036246	ENSPPAP00000038628	Myocardin.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.472
MYOCD	MEF2C	ENSPPAP00000036246	ENSPPAP00000033228	Myocardin.	Myocyte enhancer factor 2C.	0.698
NR1D2	ARNTL	ENSPPAP00000020813	ENSPPAP00000003288	Nuclear receptor subfamily 1 group D member 2.	Aryl hydrocarbon receptor nuclear translocator like.	0.801
RBFOX1	RBM24	ENSPPAP00000026499	ENSPPAP00000028123	RRM domain-containing protein.	Uncharacterized protein.	0.680
RBM24	RBFOX1	ENSPPAP00000028123	ENSPPAP00000026499	Uncharacterized protein.	RRM domain-containing protein.	0.680