(10 nodes) Autophagy protein Atg8 ubiquitin-like network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAP1LC3B	Uncharacterized protein. (121 aa)
	GABARAPL2	GABA type A receptor associated protein like 2. (117 aa)
	ENSPPAP00000022845	Uncharacterized protein. (126 aa)
	GABARAPL1	Uncharacterized protein. (117 aa)
	MAP1LC3A	Microtubule associated protein 1 light chain 3 alpha. (125 aa)
	LOC100980803	Uncharacterized protein. (117 aa)
	MAP1LC3B2	Uncharacterized protein. (125 aa)
	MAP1LC3C	Microtubule associated protein 1 light chain 3 gamma. (147 aa)
	GABARAP	GABA type A receptor-associated protein. (117 aa)
	ENSPPAP00000016281	Uncharacterized protein. (112 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPAP00000016281	ENSPPAP00000022845	ENSPPAP00000016281	ENSPPAP00000022845	Uncharacterized protein.	Uncharacterized protein.	0.639
ENSPPAP00000016281	GABARAPL1	ENSPPAP00000016281	ENSPPAP00000024645	Uncharacterized protein.	Uncharacterized protein.	0.641
ENSPPAP00000016281	GABARAPL2	ENSPPAP00000016281	ENSPPAP00000020133	Uncharacterized protein.	GABA type A receptor associated protein like 2.	0.584
ENSPPAP00000016281	MAP1LC3A	ENSPPAP00000016281	ENSPPAP00000028088	Uncharacterized protein.	Microtubule associated protein 1 light chain 3 alpha.	0.783
ENSPPAP00000016281	MAP1LC3B	ENSPPAP00000016281	ENSPPAP00000014431	Uncharacterized protein.	Uncharacterized protein.	0.676
ENSPPAP00000016281	MAP1LC3B2	ENSPPAP00000016281	ENSPPAP00000001860	Uncharacterized protein.	Uncharacterized protein.	0.670
ENSPPAP00000022845	ENSPPAP00000016281	ENSPPAP00000022845	ENSPPAP00000016281	Uncharacterized protein.	Uncharacterized protein.	0.639
ENSPPAP00000022845	GABARAP	ENSPPAP00000022845	ENSPPAP00000013712	Uncharacterized protein.	GABA type A receptor-associated protein.	0.530
ENSPPAP00000022845	GABARAPL1	ENSPPAP00000022845	ENSPPAP00000024645	Uncharacterized protein.	Uncharacterized protein.	0.533
ENSPPAP00000022845	GABARAPL2	ENSPPAP00000022845	ENSPPAP00000020133	Uncharacterized protein.	GABA type A receptor associated protein like 2.	0.692
ENSPPAP00000022845	LOC100980803	ENSPPAP00000022845	ENSPPAP00000001342	Uncharacterized protein.	Uncharacterized protein.	0.523
ENSPPAP00000022845	MAP1LC3A	ENSPPAP00000022845	ENSPPAP00000028088	Uncharacterized protein.	Microtubule associated protein 1 light chain 3 alpha.	0.475
GABARAP	ENSPPAP00000022845	ENSPPAP00000013712	ENSPPAP00000022845	GABA type A receptor-associated protein.	Uncharacterized protein.	0.530
GABARAP	GABARAPL1	ENSPPAP00000013712	ENSPPAP00000024645	GABA type A receptor-associated protein.	Uncharacterized protein.	0.638
GABARAP	GABARAPL2	ENSPPAP00000013712	ENSPPAP00000020133	GABA type A receptor-associated protein.	GABA type A receptor associated protein like 2.	0.572
GABARAP	MAP1LC3A	ENSPPAP00000013712	ENSPPAP00000028088	GABA type A receptor-associated protein.	Microtubule associated protein 1 light chain 3 alpha.	0.694
GABARAP	MAP1LC3B	ENSPPAP00000013712	ENSPPAP00000014431	GABA type A receptor-associated protein.	Uncharacterized protein.	0.529
GABARAP	MAP1LC3B2	ENSPPAP00000013712	ENSPPAP00000001860	GABA type A receptor-associated protein.	Uncharacterized protein.	0.526
GABARAPL1	ENSPPAP00000016281	ENSPPAP00000024645	ENSPPAP00000016281	Uncharacterized protein.	Uncharacterized protein.	0.641
GABARAPL1	ENSPPAP00000022845	ENSPPAP00000024645	ENSPPAP00000022845	Uncharacterized protein.	Uncharacterized protein.	0.533