(11 nodes) Ubiquitin conserved site network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KXD1	Ubiquitin-like domain-containing protein. (231 aa)
	USP14	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (493 aa)
	LOC100987088	Ubiquitin-like domain-containing protein. (77 aa)
	UBC	Uncharacterized protein. (153 aa)
	LOC100990877	Ubiquitin-like domain-containing protein. (156 aa)
	ENSPPAP00000009924	Ubiquitin-like domain-containing protein. (84 aa)
	BAG6	BCL2 associated athanogene 6. (1162 aa)
	UBFD1	Ubiquitin family domain containing 1. (355 aa)
	RPS27A	Ribosomal protein S27a. (156 aa)
	NEDD8	NEDD8 ubiquitin like modifier. (81 aa)
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (136 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAG6	ENSPPAP00000009924	ENSPPAP00000012547	ENSPPAP00000009924	BCL2 associated athanogene 6.	Ubiquitin-like domain-containing protein.	0.424
BAG6	FAU	ENSPPAP00000012547	ENSPPAP00000034983	BCL2 associated athanogene 6.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.491
BAG6	LOC100987088	ENSPPAP00000012547	ENSPPAP00000003797	BCL2 associated athanogene 6.	Ubiquitin-like domain-containing protein.	0.424
BAG6	UBC	ENSPPAP00000012547	ENSPPAP00000005091	BCL2 associated athanogene 6.	Uncharacterized protein.	0.424
ENSPPAP00000009924	BAG6	ENSPPAP00000009924	ENSPPAP00000012547	Ubiquitin-like domain-containing protein.	BCL2 associated athanogene 6.	0.424
ENSPPAP00000009924	FAU	ENSPPAP00000009924	ENSPPAP00000034983	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.449
ENSPPAP00000009924	KXD1	ENSPPAP00000009924	ENSPPAP00000040077	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.910
ENSPPAP00000009924	LOC100987088	ENSPPAP00000009924	ENSPPAP00000003797	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.463
ENSPPAP00000009924	LOC100990877	ENSPPAP00000009924	ENSPPAP00000005800	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.816
ENSPPAP00000009924	NEDD8	ENSPPAP00000009924	ENSPPAP00000029842	Ubiquitin-like domain-containing protein.	NEDD8 ubiquitin like modifier.	0.746
ENSPPAP00000009924	RPS27A	ENSPPAP00000009924	ENSPPAP00000023056	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.816
ENSPPAP00000009924	UBFD1	ENSPPAP00000009924	ENSPPAP00000012558	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.483
ENSPPAP00000009924	USP14	ENSPPAP00000009924	ENSPPAP00000003748	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.	0.887
FAU	BAG6	ENSPPAP00000034983	ENSPPAP00000012547	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	BCL2 associated athanogene 6.	0.491
FAU	ENSPPAP00000009924	ENSPPAP00000034983	ENSPPAP00000009924	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-like domain-containing protein.	0.449
FAU	KXD1	ENSPPAP00000034983	ENSPPAP00000040077	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-like domain-containing protein.	0.996
FAU	LOC100987088	ENSPPAP00000034983	ENSPPAP00000003797	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-like domain-containing protein.	0.449
FAU	LOC100990877	ENSPPAP00000034983	ENSPPAP00000005800	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-like domain-containing protein.	0.984
FAU	NEDD8	ENSPPAP00000034983	ENSPPAP00000029842	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	NEDD8 ubiquitin like modifier.	0.732
FAU	RPS27A	ENSPPAP00000034983	ENSPPAP00000023056	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ribosomal protein S27a.	0.989