(16 nodes) Ubiquitin domain network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPPAP00000004462	Ubiquitin-like domain-containing protein. (77 aa)
	ENSPPAP00000019542	Ubiquitin-like domain-containing protein. (136 aa)
	RPS27A	Ribosomal protein S27a. (156 aa)
	NEDD8	NEDD8 ubiquitin like modifier. (81 aa)
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (136 aa)
	UBTD1	Ubiquitin domain containing 1. (220 aa)
	KXD1	Ubiquitin-like domain-containing protein. (231 aa)
	ZFAND4	Zinc finger AN1-type containing 4. (727 aa)
	ENSPPAP00000008431	Uncharacterized protein. (141 aa)
	LOC100990877	Ubiquitin-like domain-containing protein. (156 aa)
	UBC	Uncharacterized protein. (153 aa)
	UBD	Ubiquitin D. (165 aa)
	ENSPPAP00000002169	Uncharacterized protein. (173 aa)
	LOC100987088	Ubiquitin-like domain-containing protein. (77 aa)
	ENSPPAP00000009924	Ubiquitin-like domain-containing protein. (84 aa)
	ISG15	ISG15 ubiquitin like modifier. (165 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPAP00000002169	ENSPPAP00000009924	ENSPPAP00000002169	ENSPPAP00000009924	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.467
ENSPPAP00000002169	ENSPPAP00000019542	ENSPPAP00000002169	ENSPPAP00000019542	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.528
ENSPPAP00000002169	FAU	ENSPPAP00000002169	ENSPPAP00000034983	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.449
ENSPPAP00000002169	ISG15	ENSPPAP00000002169	ENSPPAP00000014623	Uncharacterized protein.	ISG15 ubiquitin like modifier.	0.489
ENSPPAP00000002169	KXD1	ENSPPAP00000002169	ENSPPAP00000040077	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.838
ENSPPAP00000002169	LOC100990877	ENSPPAP00000002169	ENSPPAP00000005800	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.704
ENSPPAP00000002169	NEDD8	ENSPPAP00000002169	ENSPPAP00000029842	Uncharacterized protein.	NEDD8 ubiquitin like modifier.	0.493
ENSPPAP00000002169	RPS27A	ENSPPAP00000002169	ENSPPAP00000023056	Uncharacterized protein.	Ribosomal protein S27a.	0.703
ENSPPAP00000002169	UBC	ENSPPAP00000002169	ENSPPAP00000005091	Uncharacterized protein.	Uncharacterized protein.	0.645
ENSPPAP00000004462	ENSPPAP00000009924	ENSPPAP00000004462	ENSPPAP00000009924	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.465
ENSPPAP00000004462	ENSPPAP00000019542	ENSPPAP00000004462	ENSPPAP00000019542	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.514
ENSPPAP00000004462	FAU	ENSPPAP00000004462	ENSPPAP00000034983	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.449
ENSPPAP00000004462	ISG15	ENSPPAP00000004462	ENSPPAP00000014623	Ubiquitin-like domain-containing protein.	ISG15 ubiquitin like modifier.	0.440
ENSPPAP00000004462	KXD1	ENSPPAP00000004462	ENSPPAP00000040077	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.834
ENSPPAP00000004462	LOC100990877	ENSPPAP00000004462	ENSPPAP00000005800	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.696
ENSPPAP00000004462	NEDD8	ENSPPAP00000004462	ENSPPAP00000029842	Ubiquitin-like domain-containing protein.	NEDD8 ubiquitin like modifier.	0.499
ENSPPAP00000004462	RPS27A	ENSPPAP00000004462	ENSPPAP00000023056	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.696
ENSPPAP00000004462	UBC	ENSPPAP00000004462	ENSPPAP00000005091	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.645
ENSPPAP00000008431	ENSPPAP00000009924	ENSPPAP00000008431	ENSPPAP00000009924	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.466
ENSPPAP00000008431	ENSPPAP00000019542	ENSPPAP00000008431	ENSPPAP00000019542	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.529