(10 nodes) v-SNARE, coiled-coil homology domain network (Pan paniscus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VAMP2	V-SNARE coiled-coil homology domain-containing protein. (118 aa)
	YKT6	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (166 aa)
	VAMP3	V-SNARE coiled-coil homology domain-containing protein. (116 aa)
	STXBP5L	Syntaxin binding protein 5 like. (1186 aa)
	VAMP1	Vesicle associated membrane protein 1. (118 aa)
	STXBP5	Syntaxin binding protein 5. (1152 aa)
	VAMP8	Vesicle associated membrane protein 8. (100 aa)
	VAMP5	Vesicle associated membrane protein 5. (116 aa)
	ENSPPAP00000013241	V-SNARE coiled-coil homology domain-containing protein. (201 aa)
	VAMP4	Vesicle associated membrane protein 4. (141 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPAP00000013241	STXBP5	ENSPPAP00000013241	ENSPPAP00000021378	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin binding protein 5.	0.729
ENSPPAP00000013241	VAMP8	ENSPPAP00000013241	ENSPPAP00000015935	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 8.	0.565
STXBP5	ENSPPAP00000013241	ENSPPAP00000021378	ENSPPAP00000013241	Syntaxin binding protein 5.	V-SNARE coiled-coil homology domain-containing protein.	0.729
STXBP5	VAMP2	ENSPPAP00000021378	ENSPPAP00000005396	Syntaxin binding protein 5.	V-SNARE coiled-coil homology domain-containing protein.	0.513
STXBP5	VAMP8	ENSPPAP00000021378	ENSPPAP00000015935	Syntaxin binding protein 5.	Vesicle associated membrane protein 8.	0.578
VAMP1	VAMP2	ENSPPAP00000023375	ENSPPAP00000005396	Vesicle associated membrane protein 1.	V-SNARE coiled-coil homology domain-containing protein.	0.929
VAMP1	VAMP3	ENSPPAP00000023375	ENSPPAP00000004128	Vesicle associated membrane protein 1.	V-SNARE coiled-coil homology domain-containing protein.	0.968
VAMP1	VAMP4	ENSPPAP00000023375	ENSPPAP00000011534	Vesicle associated membrane protein 1.	Vesicle associated membrane protein 4.	0.767
VAMP1	VAMP8	ENSPPAP00000023375	ENSPPAP00000015935	Vesicle associated membrane protein 1.	Vesicle associated membrane protein 8.	0.573
VAMP1	YKT6	ENSPPAP00000023375	ENSPPAP00000004719	Vesicle associated membrane protein 1.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.769
VAMP2	STXBP5	ENSPPAP00000005396	ENSPPAP00000021378	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin binding protein 5.	0.513
VAMP2	VAMP1	ENSPPAP00000005396	ENSPPAP00000023375	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 1.	0.929
VAMP2	VAMP3	ENSPPAP00000005396	ENSPPAP00000004128	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.991
VAMP2	VAMP4	ENSPPAP00000005396	ENSPPAP00000011534	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 4.	0.767
VAMP2	VAMP8	ENSPPAP00000005396	ENSPPAP00000015935	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 8.	0.722
VAMP2	YKT6	ENSPPAP00000005396	ENSPPAP00000004719	V-SNARE coiled-coil homology domain-containing protein.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.479
VAMP3	VAMP1	ENSPPAP00000004128	ENSPPAP00000023375	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 1.	0.968
VAMP3	VAMP2	ENSPPAP00000004128	ENSPPAP00000005396	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.991
VAMP3	VAMP4	ENSPPAP00000004128	ENSPPAP00000011534	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 4.	0.672
VAMP3	VAMP8	ENSPPAP00000004128	ENSPPAP00000015935	V-SNARE coiled-coil homology domain-containing protein.	Vesicle associated membrane protein 8.	0.780