STRINGSTRING
HSPG2 HSPG2 NCAN NCAN GPC2 GPC2 GPC3 GPC3 B3GAT3 B3GAT3 VCAN VCAN SDC4 SDC4 GPC5 GPC5 CSPG4 CSPG4 AGRN AGRN SDC3 SDC3 B4GALT7 B4GALT7 CSPG5 CSPG5 B3GAT1 B3GAT1 B3GAT2 B3GAT2 XYLT1 XYLT1 BGN BGN SDC2 SDC2 GPC4 GPC4 GPC1 GPC1 SDC1 SDC1 GPC6 GPC6 DCN DCN BCAN BCAN XYLT2 XYLT2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HSPG2Heparan sulfate proteoglycan 2. (4369 aa)
NCANNeurocan. (1321 aa)
GPC2Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (508 aa)
GPC3Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (603 aa)
B3GAT3Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (321 aa)
VCANVersican. (3396 aa)
SDC4Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (199 aa)
GPC5Glypican 5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (572 aa)
CSPG4Chondroitin sulfate proteoglycan 4. (2327 aa)
AGRNAgrin. (1816 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (396 aa)
B4GALT7Beta-1,4-galactosyltransferase 7. (381 aa)
CSPG5Chondroitin sulfate proteoglycan 5. (562 aa)
B3GAT1Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (334 aa)
B3GAT2Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (319 aa)
XYLT1Xylosyltransferase 1. (838 aa)
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (376 aa)
SDC2Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (201 aa)
GPC4Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (556 aa)
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (636 aa)
SDC1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (334 aa)
GPC6Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (501 aa)
DCNDecorin; May affect the rate of fibrils formation. (359 aa)
BCANBrevican. (907 aa)
XYLT2Xylosyltransferase 2. (823 aa)
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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