STRINGSTRING
POLD1 POLD1 MUTYH MUTYH ATAD5 ATAD5 POLE4 POLE4 RFC3 RFC3 TDG TDG RCBTB1 RCBTB1 MEIOB MEIOB PCNA PCNA POLE2 POLE2 SMUG1 SMUG1 POLE POLE LIG3 LIG3 PARP2 PARP2 POLD4 POLD4 APEX2 APEX2 VWA5A VWA5A MBD4 MBD4 NEIL2 NEIL2 RPA3 RPA3 XRCC1 XRCC1 APEX1 APEX1 RCBTB2 RCBTB2 VWA5B1 VWA5B1 RPA1 RPA1 NEIL1 NEIL1 ENSPPAP00000035310 ENSPPAP00000035310 RFC2 RFC2 PARP3 PARP3 PARP1 PARP1 RFC4 RFC4 MPG MPG LOC100989432 LOC100989432 ADPRHL2 ADPRHL2 RFC1 RFC1 POLD3 POLD3 FEN1-2 FEN1-2 POLE3 POLE3 LIG1 LIG1 RFC5 RFC5 ENSPPAP00000043136 ENSPPAP00000043136 NTHL1 NTHL1 REC114 REC114 POLB POLB PNKP PNKP ENSPPAP00000003540 ENSPPAP00000003540 UNG UNG FEN1 FEN1 VWA5B2 VWA5B2 OGG1 OGG1 ENSPPAP00000013353 ENSPPAP00000013353 POLD2 POLD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLD1DNA polymerase. (1133 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (612 aa)
ATAD5ATPase family AAA domain containing 5. (1832 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (116 aa)
RFC3Replication factor C subunit 3. (356 aa)
TDGThymine DNA glycosylase. (410 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
MEIOBUncharacterized protein. (344 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
SMUG1Single-strand-selective monofunctional uracil-DNA glycosylase 1. (270 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2286 aa)
LIG3DNA ligase. (1008 aa)
PARP2Poly [ADP-ribose] polymerase. (565 aa)
POLD4Uncharacterized protein. (107 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (518 aa)
VWA5AVon Willebrand factor A domain containing 5A. (786 aa)
MBD4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (574 aa)
NEIL2Nei like DNA glycosylase 2. (384 aa)
RPA3Replication protein A3. (121 aa)
XRCC1X-ray repair cross complementing 1. (556 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase, mitochondrial; Multifunctional protein that plays a central role in the cellular response to oxidative stress. The two major activities of APEX1 are DNA repair and redox regulation of transcriptional factors. Functions as a apurinic/apyrimidinic (AP) endodeoxyribonuclease in the DNA base excision repair (BER) pathway of DNA lesions induced by oxidative and alkylating agents. Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break w [...] (318 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (556 aa)
VWA5B1Von Willebrand factor A domain containing 5B1. (1215 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
NEIL1Nei like DNA glycosylase 1. (390 aa)
ENSPPAP00000035310Uncharacterized protein. (121 aa)
RFC2Replication factor C subunit 2. (320 aa)
PARP3Poly [ADP-ribose] polymerase. (539 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
RFC4Replication factor C subunit 4. (363 aa)
MPGN-methylpurine DNA glycosylase. (284 aa)
LOC100989432UDG domain-containing protein. (405 aa)
ADPRHL2ADP-ribosylhydrolase like 2. (364 aa)
RFC1Replication factor C subunit 1. (1148 aa)
POLD3Uncharacterized protein. (459 aa)
FEN1-2Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (308 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (146 aa)
LIG1DNA ligase. (919 aa)
RFC5Replication factor C subunit 5. (354 aa)
ENSPPAP00000043136FPG-type domain-containing protein. (297 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (312 aa)
REC114REC114 meiotic recombination protein. (265 aa)
POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (335 aa)
PNKPPolynucleotide kinase 3'-phosphatase. (521 aa)
ENSPPAP00000003540Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (246 aa)
UNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (313 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
VWA5B2Von Willebrand factor A domain containing 5B2. (1242 aa)
OGG1ENDO3c domain-containing protein. (345 aa)
ENSPPAP00000013353Uncharacterized protein. (117 aa)
POLD2DNA polymerase delta 2, accessory subunit. (504 aa)
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
Server load: low (18%) [HD]