25 items (Pan paniscus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATAD1	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family. (363 aa)
	PEX11G	Peroxisomal biogenesis factor 11 gamma. (241 aa)
	PEX11B	Peroxisomal biogenesis factor 11 beta. (259 aa)
	PEX3	Peroxisomal biogenesis factor 3. (373 aa)
	PEX13	Peroxisomal biogenesis factor 13. (403 aa)
	PXMP4	Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family. (212 aa)
	GDAP1	Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily. (358 aa)
	ABCD2	ATP binding cassette subfamily D member 2. (740 aa)
	ENSPPAP00000018513	ATPase_AAA_core domain-containing protein. (340 aa)
	GDAP1L1	Ganglioside induced differentiation associated protein 1 like 1. (367 aa)
	PEX2	Peroxisomal biogenesis factor 2. (305 aa)
	ALDH3A2	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (508 aa)
	CACUL1	Uncharacterized protein. (307 aa)
	FIS1	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (152 aa)
	PEX12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (359 aa)
	ACBD5	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (534 aa)
	SLC25A17	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	PEX14	Peroxisomal biogenesis factor 14. (377 aa)
	PEX19	Uncharacterized protein. (299 aa)
	ABCD1	ATP binding cassette subfamily D member 1. (745 aa)
	PXMP2	Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (195 aa)
	MPV17L2	MPV17 mitochondrial inner membrane protein like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (206 aa)
	ABCD3	ATP binding cassette subfamily D member 3. (659 aa)
	ENSPPAP00000037957	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (317 aa)
	PEX16	Peroxisomal membrane protein PEX16. (336 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD1	ABCD2	ENSPPAP00000032174	ENSPPAP00000014896	ATP binding cassette subfamily D member 1.	ATP binding cassette subfamily D member 2.	0.918
ABCD1	ABCD3	ENSPPAP00000032174	ENSPPAP00000033942	ATP binding cassette subfamily D member 1.	ATP binding cassette subfamily D member 3.	0.959
ABCD1	ACBD5	ENSPPAP00000032174	ENSPPAP00000027867	ATP binding cassette subfamily D member 1.	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	0.666
ABCD1	ALDH3A2	ENSPPAP00000032174	ENSPPAP00000020454	ATP binding cassette subfamily D member 1.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.444
ABCD1	ATAD1	ENSPPAP00000032174	ENSPPAP00000041973	ATP binding cassette subfamily D member 1.	ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.	0.519
ABCD1	ENSPPAP00000018513	ENSPPAP00000032174	ENSPPAP00000018513	ATP binding cassette subfamily D member 1.	ATPase_AAA_core domain-containing protein.	0.519
ABCD1	ENSPPAP00000037957	ENSPPAP00000032174	ENSPPAP00000037957	ATP binding cassette subfamily D member 1.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.569
ABCD1	FIS1	ENSPPAP00000032174	ENSPPAP00000026573	ATP binding cassette subfamily D member 1.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.502
ABCD1	GDAP1	ENSPPAP00000032174	ENSPPAP00000013501	ATP binding cassette subfamily D member 1.	Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.	0.528
ABCD1	GDAP1L1	ENSPPAP00000032174	ENSPPAP00000018574	ATP binding cassette subfamily D member 1.	Ganglioside induced differentiation associated protein 1 like 1.	0.481
ABCD1	MPV17L2	ENSPPAP00000032174	ENSPPAP00000033819	ATP binding cassette subfamily D member 1.	MPV17 mitochondrial inner membrane protein like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.429
ABCD1	PEX11B	ENSPPAP00000032174	ENSPPAP00000006154	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 11 beta.	0.679
ABCD1	PEX11G	ENSPPAP00000032174	ENSPPAP00000004778	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 11 gamma.	0.558
ABCD1	PEX12	ENSPPAP00000032174	ENSPPAP00000026589	ATP binding cassette subfamily D member 1.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.671
ABCD1	PEX13	ENSPPAP00000032174	ENSPPAP00000009936	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 13.	0.751
ABCD1	PEX14	ENSPPAP00000032174	ENSPPAP00000030433	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 14.	0.688
ABCD1	PEX16	ENSPPAP00000032174	ENSPPAP00000039431	ATP binding cassette subfamily D member 1.	Peroxisomal membrane protein PEX16.	0.674
ABCD1	PEX19	ENSPPAP00000032174	ENSPPAP00000031479	ATP binding cassette subfamily D member 1.	Uncharacterized protein.	0.919
ABCD1	PEX2	ENSPPAP00000032174	ENSPPAP00000019956	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 2.	0.562
ABCD1	PEX3	ENSPPAP00000032174	ENSPPAP00000009876	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 3.	0.834