23 items (Pan paniscus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CALML6	Calmodulin like 6. (181 aa)
	CALML5	Calmodulin like 5. (146 aa)
	CALML3	Calmodulin like 3; Belongs to the calmodulin family. (149 aa)
	CTH	Cystathionine gamma-lyase. (439 aa)
	GPX6	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (220 aa)
	TRPA1	Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family. (1109 aa)
	GPX3	Uncharacterized protein. (72 aa)
	CALML4	Calmodulin like 4. (196 aa)
	PXDNL	Peroxidasin like. (1441 aa)
	GPX8	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
	NFE2L2	Nuclear factor, erythroid 2 like 2. (605 aa)
	CALM3	Calmodulin 3; Belongs to the calmodulin family. (149 aa)
	GPX7	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (171 aa)
	KEAP1	Kelch like ECH associated protein 1. (624 aa)
	GPX4	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (214 aa)
	GPX5	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (224 aa)
	ENSPPAP00000004900	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (145 aa)
	ENSPPAP00000036267	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (139 aa)
	GPX1	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (200 aa)
	PXDN	Peroxidasin. (1479 aa)
	GPX2	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (150 aa)
	TRPV1	Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family. (850 aa)
	VCAM1	Vascular cell adhesion molecule 1. (715 aa)

Your Current Organism:

Pan paniscus

NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALM3	CALML3	ENSPPAP00000029183	ENSPPAP00000006554	Calmodulin 3; Belongs to the calmodulin family.	Calmodulin like 3; Belongs to the calmodulin family.	0.967
CALM3	CALML4	ENSPPAP00000029183	ENSPPAP00000020274	Calmodulin 3; Belongs to the calmodulin family.	Calmodulin like 4.	0.966
CALM3	CALML5	ENSPPAP00000029183	ENSPPAP00000005888	Calmodulin 3; Belongs to the calmodulin family.	Calmodulin like 5.	0.966
CALM3	CALML6	ENSPPAP00000029183	ENSPPAP00000034585	Calmodulin 3; Belongs to the calmodulin family.	Calmodulin like 6.	0.965
CALM3	TRPA1	ENSPPAP00000029183	ENSPPAP00000017502	Calmodulin 3; Belongs to the calmodulin family.	Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.	0.539
CALM3	TRPV1	ENSPPAP00000029183	ENSPPAP00000001491	Calmodulin 3; Belongs to the calmodulin family.	Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family.	0.940
CALML3	CALM3	ENSPPAP00000006554	ENSPPAP00000029183	Calmodulin like 3; Belongs to the calmodulin family.	Calmodulin 3; Belongs to the calmodulin family.	0.967
CALML3	CALML4	ENSPPAP00000006554	ENSPPAP00000020274	Calmodulin like 3; Belongs to the calmodulin family.	Calmodulin like 4.	0.947
CALML3	CALML5	ENSPPAP00000006554	ENSPPAP00000005888	Calmodulin like 3; Belongs to the calmodulin family.	Calmodulin like 5.	0.952
CALML3	CALML6	ENSPPAP00000006554	ENSPPAP00000034585	Calmodulin like 3; Belongs to the calmodulin family.	Calmodulin like 6.	0.945
CALML3	PXDN	ENSPPAP00000006554	ENSPPAP00000041699	Calmodulin like 3; Belongs to the calmodulin family.	Peroxidasin.	0.401
CALML3	PXDNL	ENSPPAP00000006554	ENSPPAP00000022915	Calmodulin like 3; Belongs to the calmodulin family.	Peroxidasin like.	0.401
CALML3	TRPA1	ENSPPAP00000006554	ENSPPAP00000017502	Calmodulin like 3; Belongs to the calmodulin family.	Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.	0.604
CALML3	TRPV1	ENSPPAP00000006554	ENSPPAP00000001491	Calmodulin like 3; Belongs to the calmodulin family.	Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family.	0.870
CALML4	CALM3	ENSPPAP00000020274	ENSPPAP00000029183	Calmodulin like 4.	Calmodulin 3; Belongs to the calmodulin family.	0.966
CALML4	CALML3	ENSPPAP00000020274	ENSPPAP00000006554	Calmodulin like 4.	Calmodulin like 3; Belongs to the calmodulin family.	0.947
CALML4	CALML5	ENSPPAP00000020274	ENSPPAP00000005888	Calmodulin like 4.	Calmodulin like 5.	0.948
CALML4	CALML6	ENSPPAP00000020274	ENSPPAP00000034585	Calmodulin like 4.	Calmodulin like 6.	0.945
CALML4	TRPA1	ENSPPAP00000020274	ENSPPAP00000017502	Calmodulin like 4.	Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.	0.604
CALML4	TRPV1	ENSPPAP00000020274	ENSPPAP00000001491	Calmodulin like 4.	Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family.	0.850