10 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBS1	Bardet-Biedl syndrome 1 protein isoform X1. (593 aa)
	BBS2	Bardet-Biedl syndrome 2 protein homolog. (721 aa)
	BBS5	T0004560 isoform 1. (341 aa)
	LZTFL1	Leucine zipper transcription factor-like 1. (299 aa)
	BBS7	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (715 aa)
	BBS4	Bardet-Biedl syndrome 4. (519 aa)
	TTC8	Tetratricopeptide repeat domain 8. (531 aa)
	BBIP1	BBSome interacting protein 1. (102 aa)
	ARL6	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family. (203 aa)
	BBS9	Bardet-Biedl syndrome 9. (887 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL6	BBIP1	ENSPTRP00000076103	ENSPTRP00000074136	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	BBSome interacting protein 1.	0.601
ARL6	BBS1	ENSPTRP00000076103	ENSPTRP00000006768	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 1 protein isoform X1.	0.817
ARL6	BBS2	ENSPTRP00000076103	ENSPTRP00000013880	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 2 protein homolog.	0.575
ARL6	BBS4	ENSPTRP00000076103	ENSPTRP00000057396	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 4.	0.572
ARL6	BBS5	ENSPTRP00000076103	ENSPTRP00000021547	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	T0004560 isoform 1.	0.569
ARL6	BBS7	ENSPTRP00000076103	ENSPTRP00000028183	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.667
ARL6	BBS9	ENSPTRP00000076103	ENSPTRP00000084776	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 9.	0.582
ARL6	LZTFL1	ENSPTRP00000076103	ENSPTRP00000025586	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Leucine zipper transcription factor-like 1.	0.452
ARL6	TTC8	ENSPTRP00000076103	ENSPTRP00000066504	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	Tetratricopeptide repeat domain 8.	0.673
BBIP1	ARL6	ENSPTRP00000074136	ENSPTRP00000076103	BBSome interacting protein 1.	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	0.601
BBIP1	BBS1	ENSPTRP00000074136	ENSPTRP00000006768	BBSome interacting protein 1.	Bardet-Biedl syndrome 1 protein isoform X1.	0.996
BBIP1	BBS2	ENSPTRP00000074136	ENSPTRP00000013880	BBSome interacting protein 1.	Bardet-Biedl syndrome 2 protein homolog.	0.996
BBIP1	BBS4	ENSPTRP00000074136	ENSPTRP00000057396	BBSome interacting protein 1.	Bardet-Biedl syndrome 4.	0.997
BBIP1	BBS5	ENSPTRP00000074136	ENSPTRP00000021547	BBSome interacting protein 1.	T0004560 isoform 1.	0.996
BBIP1	BBS7	ENSPTRP00000074136	ENSPTRP00000028183	BBSome interacting protein 1.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.996
BBIP1	BBS9	ENSPTRP00000074136	ENSPTRP00000084776	BBSome interacting protein 1.	Bardet-Biedl syndrome 9.	0.993
BBIP1	LZTFL1	ENSPTRP00000074136	ENSPTRP00000025586	BBSome interacting protein 1.	Leucine zipper transcription factor-like 1.	0.604
BBIP1	TTC8	ENSPTRP00000074136	ENSPTRP00000066504	BBSome interacting protein 1.	Tetratricopeptide repeat domain 8.	0.986
BBS1	ARL6	ENSPTRP00000006768	ENSPTRP00000076103	Bardet-Biedl syndrome 1 protein isoform X1.	ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.	0.817
BBS1	BBIP1	ENSPTRP00000006768	ENSPTRP00000074136	Bardet-Biedl syndrome 1 protein isoform X1.	BBSome interacting protein 1.	0.996