15 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CSTF3	Cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa. (717 aa)
	PCF11	PCF11, cleavage and polyadenylation factor subunit, homolog. (1686 aa)
	CPSF2	Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
	CPSF3	Cleavage and polyadenylation specificity factor 73 kDa subunit. (684 aa)
	WDR33	WD repeat domain 33. (1336 aa)
	CSTF1	Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa. (431 aa)
	CPSF4	Cleavage and polyadenylation specific factor 4, 30kDa. (269 aa)
	CLP1	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
	CPSF1	CPSF1 isoform 10. (1467 aa)
	SYMPK	SYMPK isoform 3. (1310 aa)
	CSTF2	Cleavage stimulation factor subunit 2. (597 aa)
	CK820_G0008138	CSTF2T isoform 1. (302 aa)
	FIP1L1	Pre-mRNA 3'-end-processing factor FIP1 isoform X1. (603 aa)
	ENSPTRP00000091616	annotation not available (183 aa)
	ENSPTRP00000093260	annotation not available (603 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CK820_G0008138	CLP1	ENSPTRP00000079530	ENSPTRP00000062766	CSTF2T isoform 1.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.925
CK820_G0008138	CPSF1	ENSPTRP00000079530	ENSPTRP00000063855	CSTF2T isoform 1.	CPSF1 isoform 10.	0.894
CK820_G0008138	CPSF2	ENSPTRP00000079530	ENSPTRP00000011335	CSTF2T isoform 1.	Cleavage and polyadenylation specificity factor subunit 2.	0.956
CK820_G0008138	CPSF3	ENSPTRP00000079530	ENSPTRP00000020015	CSTF2T isoform 1.	Cleavage and polyadenylation specificity factor 73 kDa subunit.	0.958
CK820_G0008138	CPSF4	ENSPTRP00000079530	ENSPTRP00000033281	CSTF2T isoform 1.	Cleavage and polyadenylation specific factor 4, 30kDa.	0.921
CK820_G0008138	CSTF1	ENSPTRP00000079530	ENSPTRP00000023478	CSTF2T isoform 1.	Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa.	0.966
CK820_G0008138	CSTF2	ENSPTRP00000079530	ENSPTRP00000067955	CSTF2T isoform 1.	Cleavage stimulation factor subunit 2.	0.943
CK820_G0008138	CSTF3	ENSPTRP00000079530	ENSPTRP00000006051	CSTF2T isoform 1.	Cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa.	0.952
CK820_G0008138	ENSPTRP00000091616	ENSPTRP00000079530	ENSPTRP00000091616	CSTF2T isoform 1.	annotation not available	0.894
CK820_G0008138	ENSPTRP00000093260	ENSPTRP00000079530	ENSPTRP00000093260	CSTF2T isoform 1.	annotation not available	0.932
CK820_G0008138	FIP1L1	ENSPTRP00000079530	ENSPTRP00000090492	CSTF2T isoform 1.	Pre-mRNA 3'-end-processing factor FIP1 isoform X1.	0.932
CK820_G0008138	PCF11	ENSPTRP00000079530	ENSPTRP00000007096	CSTF2T isoform 1.	PCF11, cleavage and polyadenylation factor subunit, homolog.	0.952
CK820_G0008138	SYMPK	ENSPTRP00000079530	ENSPTRP00000064431	CSTF2T isoform 1.	SYMPK isoform 3.	0.956
CK820_G0008138	WDR33	ENSPTRP00000079530	ENSPTRP00000021298	CSTF2T isoform 1.	WD repeat domain 33.	0.950
CLP1	CK820_G0008138	ENSPTRP00000062766	ENSPTRP00000079530	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	CSTF2T isoform 1.	0.925
CLP1	CPSF1	ENSPTRP00000062766	ENSPTRP00000063855	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	CPSF1 isoform 10.	0.845
CLP1	CPSF2	ENSPTRP00000062766	ENSPTRP00000011335	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.890
CLP1	CPSF3	ENSPTRP00000062766	ENSPTRP00000020015	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor 73 kDa subunit.	0.903
CLP1	CPSF4	ENSPTRP00000062766	ENSPTRP00000033281	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specific factor 4, 30kDa.	0.962
CLP1	CSTF1	ENSPTRP00000062766	ENSPTRP00000023478	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa.	0.814