24 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MEIS1	MEIS1 isoform 7. (465 aa)
	LOC100611078	Cyclic AMP-dependent transcription factor ATF-4 pseudogene. (318 aa)
	ABI2	Abl interactor 2. (513 aa)
	PROX1	Prospero homeobox 1. (737 aa)
	TDRD7	Tudor domain containing 7. (1098 aa)
	CTNNB1	Catenin (Cadherin-associated protein), beta 1, 88kDa. (781 aa)
	HIPK2	Homeodomain interacting protein kinase 2. (1198 aa)
	ATF4	Activating transcription factor 4 (Tax-responsive enhancer element B67). (351 aa)
	BMP4	Bone morphogenetic protein 4. (408 aa)
	PITX3	Homeobox protein. (302 aa)
	HIPK1	HIPK1 isoform 10. (1210 aa)
	EPHA2	EPH receptor A2. (976 aa)
	SKI	V-ski sarcoma viral oncogene homolog (Avian). (736 aa)
	NECTIN3	Poliovirus receptor-related 3. (549 aa)
	NECTIN1	NECTIN1 isoform 1. (517 aa)
	BMP4-2	Bone morphogenetic protein 4. (408 aa)
	CITED2	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2. (278 aa)
	ENSPTRP00000082515	annotation not available (336 aa)
	BCAR3	Breast cancer anti-estrogen resistance 3. (825 aa)
	ENSPTRP00000086525	annotation not available (336 aa)
	ENSPTRP00000087425	annotation not available (336 aa)
	SOX11	Transcription factor SOX. (441 aa)
	TBC1D20	TBC1 domain family, member 20. (403 aa)
	SOX1	SOX1 isoform 1. (391 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATF4	ENSPTRP00000082515	ENSPTRP00000024806	ENSPTRP00000082515	Activating transcription factor 4 (Tax-responsive enhancer element B67).	annotation not available	0.545
ATF4	ENSPTRP00000086525	ENSPTRP00000024806	ENSPTRP00000086525	Activating transcription factor 4 (Tax-responsive enhancer element B67).	annotation not available	0.545
ATF4	ENSPTRP00000087425	ENSPTRP00000024806	ENSPTRP00000087425	Activating transcription factor 4 (Tax-responsive enhancer element B67).	annotation not available	0.545
ATF4	LOC100611078	ENSPTRP00000024806	ENSPTRP00000069696	Activating transcription factor 4 (Tax-responsive enhancer element B67).	Cyclic AMP-dependent transcription factor ATF-4 pseudogene.	0.545
BMP4	CTNNB1	ENSPTRP00000010780	ENSPTRP00000044466	Bone morphogenetic protein 4.	Catenin (Cadherin-associated protein), beta 1, 88kDa.	0.551
BMP4-2	CTNNB1	ENSPTRP00000080656	ENSPTRP00000044466	Bone morphogenetic protein 4.	Catenin (Cadherin-associated protein), beta 1, 88kDa.	0.551
CTNNB1	BMP4	ENSPTRP00000044466	ENSPTRP00000010780	Catenin (Cadherin-associated protein), beta 1, 88kDa.	Bone morphogenetic protein 4.	0.551
CTNNB1	BMP4-2	ENSPTRP00000044466	ENSPTRP00000080656	Catenin (Cadherin-associated protein), beta 1, 88kDa.	Bone morphogenetic protein 4.	0.551
CTNNB1	EPHA2	ENSPTRP00000044466	ENSPTRP00000000400	Catenin (Cadherin-associated protein), beta 1, 88kDa.	EPH receptor A2.	0.559
CTNNB1	NECTIN1	ENSPTRP00000044466	ENSPTRP00000080196	Catenin (Cadherin-associated protein), beta 1, 88kDa.	NECTIN1 isoform 1.	0.689
CTNNB1	SOX1	ENSPTRP00000044466	ENSPTRP00000061108	Catenin (Cadherin-associated protein), beta 1, 88kDa.	SOX1 isoform 1.	0.567
CTNNB1	SOX11	ENSPTRP00000044466	ENSPTRP00000090911	Catenin (Cadherin-associated protein), beta 1, 88kDa.	Transcription factor SOX.	0.554
ENSPTRP00000082515	ATF4	ENSPTRP00000082515	ENSPTRP00000024806	annotation not available	Activating transcription factor 4 (Tax-responsive enhancer element B67).	0.545
ENSPTRP00000082515	ENSPTRP00000086525	ENSPTRP00000082515	ENSPTRP00000086525	annotation not available	annotation not available	0.543
ENSPTRP00000082515	ENSPTRP00000087425	ENSPTRP00000082515	ENSPTRP00000087425	annotation not available	annotation not available	0.543
ENSPTRP00000082515	LOC100611078	ENSPTRP00000082515	ENSPTRP00000069696	annotation not available	Cyclic AMP-dependent transcription factor ATF-4 pseudogene.	0.550
ENSPTRP00000086525	ATF4	ENSPTRP00000086525	ENSPTRP00000024806	annotation not available	Activating transcription factor 4 (Tax-responsive enhancer element B67).	0.545
ENSPTRP00000086525	ENSPTRP00000082515	ENSPTRP00000086525	ENSPTRP00000082515	annotation not available	annotation not available	0.543
ENSPTRP00000086525	ENSPTRP00000087425	ENSPTRP00000086525	ENSPTRP00000087425	annotation not available	annotation not available	0.543
ENSPTRP00000086525	LOC100611078	ENSPTRP00000086525	ENSPTRP00000069696	annotation not available	Cyclic AMP-dependent transcription factor ATF-4 pseudogene.	0.550