9 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAML1	MAML1 isoform 1. (1016 aa)
	NOTCH1	NOTCH1 isoform 1. (2555 aa)
	GATA4	GATA binding protein 4. (443 aa)
	NOTCH2	NOTCH2 isoform 1. (2612 aa)
	TBX5	T-box transcription factor 5. (518 aa)
	ENSPTRP00000064416	annotation not available (502 aa)
	BMPR1A	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
	GATA6	GATA binding protein 6. (594 aa)
	NKX2-5	NKX2-5 isoform 1. (325 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GATA4	GATA6	ENSPTRP00000075865	ENSPTRP00000016858	GATA binding protein 4.	GATA binding protein 6.	0.493
GATA4	NKX2-5	ENSPTRP00000075865	ENSPTRP00000029961	GATA binding protein 4.	NKX2-5 isoform 1.	0.998
GATA4	TBX5	ENSPTRP00000075865	ENSPTRP00000069028	GATA binding protein 4.	T-box transcription factor 5.	0.953
GATA6	GATA4	ENSPTRP00000016858	ENSPTRP00000075865	GATA binding protein 6.	GATA binding protein 4.	0.493
GATA6	NKX2-5	ENSPTRP00000016858	ENSPTRP00000029961	GATA binding protein 6.	NKX2-5 isoform 1.	0.826
GATA6	TBX5	ENSPTRP00000016858	ENSPTRP00000069028	GATA binding protein 6.	T-box transcription factor 5.	0.590
MAML1	NOTCH1	ENSPTRP00000056639	ENSPTRP00000036924	MAML1 isoform 1.	NOTCH1 isoform 1.	0.999
MAML1	NOTCH2	ENSPTRP00000056639	ENSPTRP00000075807	MAML1 isoform 1.	NOTCH2 isoform 1.	0.978
NKX2-5	GATA4	ENSPTRP00000029961	ENSPTRP00000075865	NKX2-5 isoform 1.	GATA binding protein 4.	0.998
NKX2-5	GATA6	ENSPTRP00000029961	ENSPTRP00000016858	NKX2-5 isoform 1.	GATA binding protein 6.	0.826
NKX2-5	TBX5	ENSPTRP00000029961	ENSPTRP00000069028	NKX2-5 isoform 1.	T-box transcription factor 5.	0.996
NOTCH1	MAML1	ENSPTRP00000036924	ENSPTRP00000056639	NOTCH1 isoform 1.	MAML1 isoform 1.	0.999
NOTCH1	NOTCH2	ENSPTRP00000036924	ENSPTRP00000075807	NOTCH1 isoform 1.	NOTCH2 isoform 1.	0.945
NOTCH2	MAML1	ENSPTRP00000075807	ENSPTRP00000056639	NOTCH2 isoform 1.	MAML1 isoform 1.	0.978
NOTCH2	NOTCH1	ENSPTRP00000075807	ENSPTRP00000036924	NOTCH2 isoform 1.	NOTCH1 isoform 1.	0.945
TBX5	GATA4	ENSPTRP00000069028	ENSPTRP00000075865	T-box transcription factor 5.	GATA binding protein 4.	0.953
TBX5	GATA6	ENSPTRP00000069028	ENSPTRP00000016858	T-box transcription factor 5.	GATA binding protein 6.	0.590
TBX5	NKX2-5	ENSPTRP00000069028	ENSPTRP00000029961	T-box transcription factor 5.	NKX2-5 isoform 1.	0.996