STRINGSTRING
PRPF38A PRPF38A SNRPA1 SNRPA1 ZRSR2 ZRSR2 PRPF39 PRPF39 YJU2 YJU2 RBMXL3 RBMXL3 RBM41 RBM41 SNRNP70 SNRNP70 SF3A1 SF3A1 PRPF40B PRPF40B PRPF4B PRPF4B HNRNPF HNRNPF AAR2 AAR2 DHX35 DHX35 RALY RALY CRNKL1 CRNKL1 DDX39B DDX39B ENSPTRP00000056555 ENSPTRP00000056555 SNRNP35 SNRNP35 CK820_G0025516 CK820_G0025516 PRPF8 PRPF8 HNRNPA1L2 HNRNPA1L2 LOC746306 LOC746306 PRKRIP1 PRKRIP1 PRPF3 PRPF3 SNRPE SNRPE PRPF4 PRPF4 ENSPTRP00000062406 ENSPTRP00000062406 HNRNPK HNRNPK WBP4 WBP4 EIF4A3 EIF4A3 SNRPB SNRPB DDX41 DDX41 ENSPTRP00000063765 ENSPTRP00000063765 SNW1 SNW1 ENSPTRP00000064700 ENSPTRP00000064700 PDCD7 PDCD7 SYNCRIP SYNCRIP ENSPTRP00000065718 ENSPTRP00000065718 ENSPTRP00000065742 ENSPTRP00000065742 LOC101056877 LOC101056877 ENSPTRP00000066188 ENSPTRP00000066188 PRPF18 PRPF18 LOC107969647 LOC107969647 ENSPTRP00000066498 ENSPTRP00000066498 ENSPTRP00000066562 ENSPTRP00000066562 LOC747903 LOC747903 CK820_G0037783 CK820_G0037783 ENSPTRP00000066742 ENSPTRP00000066742 CK820_G0001591 CK820_G0001591 SNRPG SNRPG LSM8 LSM8 HTATSF1 HTATSF1 ENSPTRP00000067611 ENSPTRP00000067611 ENSPTRP00000067637 ENSPTRP00000067637 ENSPTRP00000067759 ENSPTRP00000067759 SNRPN SNRPN LOC737444 LOC737444 ENSPTRP00000068377 ENSPTRP00000068377 ENSPTRP00000068382 ENSPTRP00000068382 SNRPD2 SNRPD2 HNRNPR HNRNPR ENSPTRP00000068602 ENSPTRP00000068602 LOC101057672 LOC101057672 UPF1 UPF1 CK820_G0042963 CK820_G0042963 SF3B2 SF3B2 PABPC1 PABPC1 ENSPTRP00000069388 ENSPTRP00000069388 ENSPTRP00000069455 ENSPTRP00000069455 ENSPTRP00000069700 ENSPTRP00000069700 CASC3 CASC3 LOC744520 LOC744520 ENSPTRP00000070165 ENSPTRP00000070165 LOC736868 LOC736868 SNU13 SNU13 LOC742392 LOC742392 RBM5 RBM5 ENSPTRP00000071139 ENSPTRP00000071139 ENSPTRP00000071198 ENSPTRP00000071198 ENSPTRP00000071468 ENSPTRP00000071468 GPKOW GPKOW CDC5L CDC5L ENSPTRP00000071723 ENSPTRP00000071723 LOC107975110 LOC107975110 ENSPTRP00000071944 ENSPTRP00000071944 CK820_G0018565 CK820_G0018565 SNU13-2 SNU13-2 CK820_G0015337 CK820_G0015337 ENSPTRP00000072797 ENSPTRP00000072797 CWC15 CWC15 ENSPTRP00000074100 ENSPTRP00000074100 ENSPTRP00000074124 ENSPTRP00000074124 RBM44 RBM44 HNRNPH1 HNRNPH1 PPIH PPIH ENSPTRP00000093626 ENSPTRP00000093626 ENSPTRP00000093514 ENSPTRP00000093514 WAC WAC CLNS1A-2 CLNS1A-2 API5 API5 ENSPTRP00000092481 ENSPTRP00000092481 ENSPTRP00000092082 ENSPTRP00000092082 ENSPTRP00000091747 ENSPTRP00000091747 IK IK LSM4 LSM4 SNRPD1 SNRPD1 ENSPTRP00000091366 ENSPTRP00000091366 ENSPTRP00000078631 ENSPTRP00000078631 ENSPTRP00000078565 ENSPTRP00000078565 LOC739651 LOC739651 LOC459635 LOC459635 ENSPTRP00000077950 ENSPTRP00000077950 AKAP17A AKAP17A SREK1 SREK1 RBMX RBMX LOC107966666 LOC107966666 SNRPF-2 SNRPF-2 MYEF2 MYEF2 ENSPTRP00000076412 ENSPTRP00000076412 ENSPTRP00000076399 ENSPTRP00000076399 YBX1 YBX1 ENSPTRP00000076001 ENSPTRP00000076001 U2AF1L4 U2AF1L4 ENSPTRP00000075572 ENSPTRP00000075572 HNRNPC HNRNPC LOC100612723 LOC100612723 ENSPTRP00000074935 ENSPTRP00000074935 LOC104004819 LOC104004819 CK820_G0054214 CK820_G0054214 HSPA8 HSPA8 SRRM2 SRRM2 ENSPTRP00000074429 ENSPTRP00000074429 ENSPTRP00000074420 ENSPTRP00000074420 TXNL4A TXNL4A RBM22 RBM22 PPIE PPIE U2AF2 U2AF2 CK820_G0044510 CK820_G0044510 CTNNBL1 CTNNBL1 SRSF1 SRSF1 ENSPTRP00000090636 ENSPTRP00000090636 HNRNPA3 HNRNPA3 FRG1-2 FRG1-2 MAGOHB MAGOHB PPIL3 PPIL3 ENSPTRP00000089678 ENSPTRP00000089678 ENSPTRP00000089670 ENSPTRP00000089670 SF1 SF1 DHX38 DHX38 ALYREF ALYREF LOC100611704 LOC100611704 PRPF19 PRPF19 ENSPTRP00000088936 ENSPTRP00000088936 RBMX2 RBMX2 CLNS1A CLNS1A RHEB RHEB ENSPTRP00000087648 ENSPTRP00000087648 ENSPTRP00000087463 ENSPTRP00000087463 PTBP2 PTBP2 DDX23 DDX23 LOC104001533 LOC104001533 HNRNPA1 HNRNPA1 ADAR ADAR SNRPG-2 SNRPG-2 SNRNP48 SNRNP48 ENSPTRP00000084908 ENSPTRP00000084908 HNRNPU HNRNPU ENSPTRP00000084407 ENSPTRP00000084407 ENSPTRP00000084254 ENSPTRP00000084254 LUC7L3 LUC7L3 RBM17 RBM17 ENSPTRP00000082994 ENSPTRP00000082994 CK820_G0054214-2 CK820_G0054214-2 ENSPTRP00000082367 ENSPTRP00000082367 LOC472599 LOC472599 ENSPTRP00000081714 ENSPTRP00000081714 ENSPTRP00000081550 ENSPTRP00000081550 DDX46 DDX46 ENSPTRP00000081347 ENSPTRP00000081347 ZCCHC8 ZCCHC8 ENSPTRP00000080859 ENSPTRP00000080859 CK820_G0047358 CK820_G0047358 DHX16 DHX16 ENSPTRP00000079802 ENSPTRP00000079802 ENSPTRP00000079736 ENSPTRP00000079736 ENSPTRP00000079261 ENSPTRP00000079261 ENSPTRP00000079250 ENSPTRP00000079250 ENSPTRP00000078900 ENSPTRP00000078900 SLU7 SLU7 LOC452975 LOC452975 ENSPTRP00000078685 ENSPTRP00000078685 SRRM1 SRRM1 SYF2 SYF2 PPP1R8 PPP1R8 SNRNP40 SNRNP40 SNIP1 SNIP1 SF3A3 SF3A3 MAGOH MAGOH PRPF38B PRPF38B BCAS2 BCAS2 TTF2 TTF2 RBM8A RBM8A SF3B4 SF3B4 IVNS1ABP IVNS1ABP HNRNPH3 HNRNPH3 CWF19L1 CWF19L1 SMNDC1 SMNDC1 DHX32 DHX32 RBMXL2 RBMXL2 SART1 SART1 CWF19L2 CWF19L2 BUD13 BUD13 WBP11 WBP11 ZCRB1 ZCRB1 SNRPF SNRPF GEMIN2 GEMIN2 PNN PNN LGALS3 LGALS3 ZC2HC1C ZC2HC1C WDR25 WDR25 AQR AQR DNAJC17 DNAJC17 MFAP1 MFAP1 SNRNP25 SNRNP25 LUC7L LUC7L SF3B3 SF3B3 TXNL4B TXNL4B EIF4A1 EIF4A1 ZNF830 ZNF830 CWC25 CWC25 DHX8 DHX8 EFTUD2 EFTUD2 DDX5 DDX5 CIRBP CIRBP SF3A2 SF3A2 LSM7 LSM7 CACTIN CACTIN HNRNPM HNRNPM WDR83 WDR83 CCDC130 CCDC130 SUGP1 SUGP1 GPATCH1 GPATCH1 C19H19orf54 C19H19orf54 SNRPA SNRPA PRPF31 PRPF31 SF3B6 SF3B6 DQX1 DQX1 GCFC2 GCFC2 USP39 USP39 SNRNP200 SNRNP200 CWC22 CWC22 SF3B1 SF3B1 NCL NCL SNRPB2 SNRPB2 ENSPTRP00000022886 ENSPTRP00000022886 PRPF6 PRPF6 ESS2 ESS2 PPIL2 PPIL2 SNRPD3 SNRPD3 TFIP11 TFIP11 ZMAT5 ZMAT5 PHF5A PHF5A LSM3 LSM3 CCDC12 CCDC12 ISY1 ISY1 TRA2B TRA2B DHX15 DHX15 HNRNPDL HNRNPDL LSM6 LSM6 PLRG1 PLRG1 FRG1 FRG1 MTREX MTREX CWC27 CWC27 PPWD1 PPWD1 CK820_G0038484 CK820_G0038484 ZMAT2 ZMAT2 LSM2 LSM2 SNRPC SNRPC PPIL1 PPIL1 CDC40 CDC40 SF3B5 SF3B5 TRA2A TRA2A HNRNPA2B1 HNRNPA2B1 LSM5 LSM5 BUD31 BUD31 RBM28 RBM28 FMC1-LUC7L2 FMC1-LUC7L2 SMU1 SMU1 C9H9orf78 C9H9orf78 RBM3 RBM3 RNF113A RNF113A XAB2 XAB2 RNPC3 RNPC3 PRPF40A PRPF40A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRPF38APRP38 pre-mRNA processing factor 38 domain containing A. (312 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
ZRSR2Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (478 aa)
PRPF39PRP39 pre-mRNA processing factor 39 homolog. (669 aa)
YJU2Coiled-coil domain containing 94. (323 aa)
RBMXL3RNA-binding motif protein, X-linked-like-3. (1068 aa)
RBM41RNA binding motif protein 41. (470 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (437 aa)
SF3A1Splicing factor 3a, subunit 1, 120kDa. (793 aa)
PRPF40BPRPF40B isoform 2. (871 aa)
PRPF4BPRP4 pre-mRNA processing factor 4 homolog B. (1007 aa)
HNRNPFHeterogeneous nuclear ribonucleoprotein F. (415 aa)
AAR2AAR2 splicing factor. (398 aa)
DHX35DEAH (Asp-Glu-Ala-His) box polypeptide 35. (703 aa)
RALYRNA binding protein, autoantigenic (HnRNP-associated with lethal yellow homolog ). (307 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (687 aa)
DDX39BSpliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...] (428 aa)
ENSPTRP00000056555Heterogeneous nuclear ribonucleoprotein A3-like. (289 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (251 aa)
CK820_G0025516YBX1 isoform 1. (320 aa)
PRPF8PRP8 pre-mRNA processing factor 8 homolog. (2335 aa)
HNRNPA1L2HNRNPA1L2 isoform 1. (291 aa)
LOC746306Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed; Involved in the packaging of pre-mRNA into hnRNP particles, transport of poly(A) mRNA from the nucleus to the cytoplasm and may modulate splice site selection. May bind to specific miRNA hairpins. Binds to the IRES and thereby inhibits the translation of the apoptosis protease activating factor APAF1. (320 aa)
PRKRIP1PRKR interacting protein 1. (184 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3. (683 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
PRPF4PRP4 pre-mRNA processing factor 4 homolog. (539 aa)
ENSPTRP00000062406annotation not available (534 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K. (464 aa)
WBP4WW domain binding protein 4 (Formin binding protein 21). (376 aa)
EIF4A3Uncharacterized protein; Belongs to the DEAD box helicase family. (413 aa)
SNRPBSmall nuclear ribonucleoprotein polypeptides B and B1. (289 aa)
DDX41DDX41 isoform 11. (637 aa)
ENSPTRP00000063765annotation not available (270 aa)
SNW1SNW domain containing 1. (571 aa)
ENSPTRP00000064700annotation not available (331 aa)
PDCD7Programmed cell death 7. (485 aa)
SYNCRIPSynaptotagmin binding, cytoplasmic RNA interacting protein. (562 aa)
ENSPTRP00000065718annotation not available (335 aa)
ENSPTRP00000065742annotation not available (272 aa)
LOC101056877Heterogeneous nuclear ribonucleoprotein A3 pseudogene. (316 aa)
ENSPTRP00000066188annotation not available (193 aa)
PRPF18T0122213 isoform 1. (351 aa)
LOC107969647Small nuclear ribonucleoprotein E pseudogene. (83 aa)
ENSPTRP00000066498annotation not available (397 aa)
ENSPTRP00000066562annotation not available (84 aa)
LOC747903Nuclease-sensitive element-binding protein 1 pseudogene. (306 aa)
CK820_G0037783LSM5 isoform 6. (87 aa)
ENSPTRP00000066742annotation not available (458 aa)
CK820_G0001591HNRNPA3 isoform 4. (303 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (75 aa)
HTATSF1HIV-1 Tat specific factor 1. (755 aa)
ENSPTRP00000067611annotation not available (252 aa)
ENSPTRP00000067637annotation not available (92 aa)
ENSPTRP00000067759annotation not available (739 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein N. (244 aa)
LOC737444Heterogeneous nuclear ribonucleoprotein K pseudogene. (423 aa)
ENSPTRP00000068377annotation not available (199 aa)
ENSPTRP00000068382annotation not available (728 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (636 aa)
ENSPTRP00000068602annotation not available (162 aa)
LOC101057672Heterogeneous nuclear ribonucleoprotein Q pseudogene. (465 aa)
UPF1UPF1 RNA helicase and ATPase. (1129 aa)
CK820_G0042963RHEB isoform 3. (182 aa)
SF3B2Splicing factor 3b, subunit 2, 145kDa. (898 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
ENSPTRP00000069388annotation not available (65 aa)
ENSPTRP00000069455annotation not available (428 aa)
ENSPTRP00000069700annotation not available (123 aa)
CASC3CASC3 exon junction complex subunit. (584 aa)
LOC744520Heterogeneous nuclear ribonucleoprotein A3 pseudogene. (301 aa)
ENSPTRP00000070165annotation not available (67 aa)
LOC736868Protein mago nashi homolog. (148 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC742392Protein Red-like. (531 aa)
RBM5RNA binding motif protein 5. (823 aa)
ENSPTRP00000071139RNA-binding protein Musashi homolog Rbp6-like. (107 aa)
ENSPTRP00000071198annotation not available (133 aa)
ENSPTRP00000071468annotation not available (499 aa)
GPKOWG-patch domain and KOW motifs. (476 aa)
CDC5LCDC5 cell division cycle 5-like. (802 aa)
ENSPTRP00000071723annotation not available (250 aa)
LOC107975110Heterogeneous nuclear ribonucleoprotein A1-like. (300 aa)
ENSPTRP00000071944annotation not available (260 aa)
CK820_G0018565SNRPD1 isoform 2. (117 aa)
SNU13-2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
CK820_G0015337Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (68 aa)
ENSPTRP00000072797annotation not available (191 aa)
CWC15CWC15 spliceosome-associated protein homolog. (229 aa)
ENSPTRP00000074100annotation not available (417 aa)
ENSPTRP00000074124annotation not available (400 aa)
RBM44RNA binding motif protein 44. (1052 aa)
HNRNPH1HNRNPH1 isoform 31. (472 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
ENSPTRP00000093626annotation not available (450 aa)
ENSPTRP00000093514annotation not available (292 aa)
WACWW domain containing adaptor with coiled-coil. (653 aa)
CLNS1A-2Chloride nucleotide-sensitive channel 1A. (134 aa)
API5Apoptosis inhibitor 5. (524 aa)
ENSPTRP00000092481annotation not available (408 aa)
ENSPTRP00000092082annotation not available (189 aa)
ENSPTRP00000091747annotation not available (340 aa)
IKIK isoform 2. (557 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (238 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (127 aa)
ENSPTRP00000091366annotation not available (327 aa)
ENSPTRP00000078631annotation not available (389 aa)
ENSPTRP00000078565annotation not available (328 aa)
LOC739651U2 small nuclear ribonucleoprotein A' pseudogene. (260 aa)
LOC459635Heterogeneous nuclear ribonucleoprotein K pseudogene. (418 aa)
ENSPTRP00000077950annotation not available (67 aa)
AKAP17AA kinase (PRKA) anchor protein 17A. (695 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (626 aa)
RBMXRNA-binding motif protein, X chromosome, N-terminally processed; RNA-binding protein that plays several role in the regulation of pre- and post-transcriptional processes. Implicated in tissue- specific regulation of gene transcription and alternative splicing of several pre-mRNAs. Binds to and stimulates transcription from the tumor suppressor TXNIP gene promoter; may thus be involved in tumor suppression. When associated with SAFB, binds to and stimulates transcription from the SREBF1 promoter. Associates with nascent mRNAs transcribed by RNA polymerase II. Component of the suprasplic [...] (391 aa)
LOC107966666Heterogeneous nuclear ribonucleoprotein A3 pseudogene. (259 aa)
SNRPF-2Small nuclear ribonucleoprotein polypeptide F. (78 aa)
MYEF2Myelin expression factor 2. (600 aa)
ENSPTRP00000076412annotation not available (213 aa)
ENSPTRP00000076399annotation not available (125 aa)
YBX1YBX1 isoform 3. (295 aa)
ENSPTRP00000076001annotation not available (125 aa)
U2AF1L4U2 small nuclear RNA auxiliary factor 1. (220 aa)
ENSPTRP00000075572annotation not available (229 aa)
HNRNPCHNRNPC isoform 14. (321 aa)
LOC100612723Polyadenylate-binding protein 1 pseudogene. (281 aa)
ENSPTRP00000074935annotation not available (355 aa)
LOC104004819Nuclease-sensitive element-binding protein 1 pseudogene. (315 aa)
CK820_G0054214FRG1 isoform 4. (220 aa)
HSPA8Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family. (646 aa)
SRRM2SRRM2 isoform 2. (2753 aa)
ENSPTRP00000074429annotation not available (586 aa)
ENSPTRP00000074420annotation not available (260 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
RBM22RNA binding motif protein 22. (423 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (314 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
CK820_G0044510HNRNPH1 isoform 48. (373 aa)
CTNNBL1Catenin beta like 1. (568 aa)
SRSF1Serine and arginine rich splicing factor 1. (253 aa)
ENSPTRP00000090636annotation not available (268 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (378 aa)
FRG1-2FSHD region gene 1. (258 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (180 aa)
ENSPTRP00000089678annotation not available (488 aa)
ENSPTRP00000089670annotation not available (48 aa)
SF1Splicing factor 1. (675 aa)
DHX38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1229 aa)
ALYREFAly/REF export factor. (285 aa)
LOC100611704Polyadenylate-binding protein 1 pseudogene. (294 aa)
PRPF19PRP19/PSO4 pre-mRNA processing factor 19 homolog. (509 aa)
ENSPTRP00000088936annotation not available (286 aa)
RBMX2RNA binding motif protein, X-linked 2. (322 aa)
CLNS1AChloride channel, nucleotide-sensitive, 1A. (237 aa)
RHEBRHEB isoform 1. (184 aa)
ENSPTRP00000087648annotation not available (200 aa)
ENSPTRP00000087463annotation not available (204 aa)
PTBP2Polypyrimidine tract binding protein 2. (543 aa)
DDX23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (820 aa)
LOC104001533Heterogeneous nuclear ribonucleoprotein A3 pseudogene. (298 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (372 aa)
ADARAdenosine deaminase, RNA-specific. (1229 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
SNRNP48Small nuclear ribonucleoprotein U11/U12 subunit 48. (339 aa)
ENSPTRP00000084908annotation not available (2753 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U (Scaffold attachment factor A). (825 aa)
ENSPTRP00000084407annotation not available (305 aa)
ENSPTRP00000084254annotation not available (107 aa)
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (489 aa)
RBM17RNA binding motif protein 17. (401 aa)
ENSPTRP00000082994annotation not available (74 aa)
CK820_G0054214-2FRG1 isoform 3. (140 aa)
ENSPTRP00000082367annotation not available (453 aa)
LOC472599Heat shock cognate 71 kDa protein pseudogene. (400 aa)
ENSPTRP00000081714annotation not available (310 aa)
ENSPTRP00000081550annotation not available (489 aa)
DDX46DEAD-box helicase 46. (1031 aa)
ENSPTRP00000081347annotation not available (165 aa)
ZCCHC8Zinc finger, CCHC domain containing 8. (707 aa)
ENSPTRP00000080859annotation not available (310 aa)
CK820_G0047358HNRNPC isoform 12. (95 aa)
DHX16Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; Required for pre-mRNA splicing as component of the spliceosome. Contributes to pre-mRNA splicing after spliceosome formation and prior to the first transesterification reaction. Belongs to the DEAD box helicase family. DEAH subfamily. DDX16/PRP8 sub-subfamily. (1050 aa)
ENSPTRP00000079802annotation not available (567 aa)
ENSPTRP00000079736annotation not available (235 aa)
ENSPTRP00000079261annotation not available (87 aa)
ENSPTRP00000079250annotation not available (155 aa)
ENSPTRP00000078900annotation not available (71 aa)
SLU7Ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific). (586 aa)
LOC452975Nuclease-sensitive element-binding protein 1 pseudogene. (328 aa)
ENSPTRP00000078685annotation not available (282 aa)
SRRM1SRRM1 isoform 3. (918 aa)
SYF2SYF2 homolog, RNA splicing factor. (243 aa)
PPP1R8Protein phosphatase 1, regulatory (Inhibitor) subunit 8. (351 aa)
SNRNP40Small nuclear ribonucleoprotein U5 subunit 40. (357 aa)
SNIP1Smad nuclear interacting protein 1. (396 aa)
SF3A3Splicing factor 3a, subunit 3, 60kDa. (501 aa)
MAGOHMago-nashi homolog, proliferation-associated. (146 aa)
PRPF38BPRP38 pre-mRNA processing factor 38 domain containing B. (546 aa)
BCAS2BCAS2 pre-mRNA processing factor. (225 aa)
TTF2Transcription termination factor, RNA polymerase II. (1162 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
SF3B4Splicing factor 3b, subunit 4, 49kDa. (424 aa)
IVNS1ABPInfluenza virus NS1A binding protein. (642 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3 (2H9). (346 aa)
CWF19L1CWF19 like cell cycle control factor 1. (538 aa)
SMNDC1Survival motor neuron domain containing 1. (238 aa)
DHX32DEAH (Asp-Glu-Ala-His) box polypeptide 32. (744 aa)
RBMXL2Testes-specific heterogenous nuclear ribonucleoprotein G-T. (392 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (800 aa)
CWF19L2CWF19 like cell cycle control factor 2. (894 aa)
BUD13BUD13 isoform 1. (619 aa)
WBP11WW domain binding protein 11. (641 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif containing 1. (217 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (127 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (280 aa)
PNNPinin, desmosome associated protein. (719 aa)
LGALS3Galectin. (250 aa)
ZC2HC1CZinc finger C2HC-type containing 1C. (456 aa)
WDR25WD repeat domain 25. (544 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1485 aa)
DNAJC17DnaJ heat shock protein family (Hsp40) member C17. (304 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
SNRNP25Small nuclear ribonucleoprotein U11/U12 subunit 25. (132 aa)
LUC7LLUC7L isoform 1. (361 aa)
SF3B3Splicing factor 3b, subunit 3, 130kDa. (1217 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
EIF4A1Eukaryotic initiation factor 4A-I; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity). (406 aa)
ZNF830Zinc finger protein 830. (388 aa)
CWC25CWC25 spliceosome-associated protein homolog. (425 aa)
DHX8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1220 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Involved in the alternative regulation of pre-mRNA splicing; its RNA helicase activity is necessary for increasing tau exon 10 inclusion and occurs in a RBM4-dependent manner. Binds to the tau pre- mRNA in the stem-loop region downstream of exon 10. The rate of ATP hydrolysis is highly stimulated by single-stranded RNA. Involved in transcriptional regulation; the function is independent of the RNA helicase activity. Transcriptional coactivator for androgen receptor AR but probably not ESR1. Synergizes with DDX17 and SRA1 RNA to activate MYOD1 t [...] (614 aa)
CIRBPCold inducible RNA binding protein. (247 aa)
SF3A2Splicing factor 3a, subunit 2, 66kDa. (464 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
CACTINCactin, spliceosome C complex subunit. (756 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)
WDR83WD repeat domain 83. (315 aa)
CCDC130Coiled-coil domain containing 130. (396 aa)
SUGP1SURP and G-patch domain containing 1. (645 aa)
GPATCH1G-patch domain containing 1. (931 aa)
C19H19orf54Chromosome 19 open reading frame 54. (351 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
PRPF31PRP31 pre-mRNA processing factor 31 homolog. (499 aa)
SF3B6Splicing factor 3B, 14 kDa subunit. (125 aa)
DQX1DEAQ-box RNA dependent ATPase 1. (717 aa)
GCFC2GC-rich sequence DNA-binding factor 2. (781 aa)
USP39Ubiquitin specific peptidase 39. (565 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
CWC22CWC22 spliceosome-associated protein homolog. (908 aa)
SF3B1Splicing factor 3b, subunit 1, 155kDa. (1267 aa)
NCLNCL isoform 2. (711 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
ENSPTRP00000022886annotation not available (107 aa)
PRPF6PRP6 pre-mRNA processing factor 6 homolog. (941 aa)
ESS2DiGeorge syndrome critical region gene 14. (476 aa)
PPIL2Peptidylprolyl isomerase (Cyclophilin)-like 2. (520 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
ZMAT5Zinc finger, matrin-type 5. (170 aa)
PHF5APHD finger protein 5A. (110 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
CCDC12Coiled-coil domain containing 12. (179 aa)
ISY1ISY1 splicing factor homolog. (307 aa)
TRA2BTransformer 2 beta homolog. (288 aa)
DHX15DEAH (Asp-Glu-Ala-His) box polypeptide 15. (795 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D-like. (420 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
PLRG1Pleiotropic regulator 1. (514 aa)
FRG1FSHD region gene 1. (258 aa)
MTREXSuperkiller viralicidic activity 2-like 2. (1042 aa)
CWC27CWC27 spliceosome-associated protein homolog. (472 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (646 aa)
CK820_G0038484ZRSR1 isoform 1. (479 aa)
ZMAT2Zinc finger, matrin-type 2. (199 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
CDC40Cell division cycle 40 homolog. (579 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
TRA2ATransformer 2 alpha homolog. (282 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
BUD31BUD31 isoform 1. (144 aa)
RBM28RNA binding motif protein 28. (761 aa)
FMC1-LUC7L2Chromosome 7 open reading frame 55. (454 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
C9H9orf78Chromosome 9 open reading frame 78. (289 aa)
RBM3RNA binding motif (RNP1, RRM) protein 3. (157 aa)
RNF113ARing finger protein 113A. (343 aa)
XAB2XPA binding protein 2. (855 aa)
RNPC3RNA-binding region (RNP1, RRM) containing 3. (517 aa)
PRPF40APRP40 pre-mRNA processing factor 40 homolog A. (930 aa)
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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