STRINGSTRING
SNIP1 SNIP1 SF3A3 SF3A3 SF3B4 SF3B4 BUD13 BUD13 SNRPF SNRPF SF3B3 SF3B3 SF3A2 SF3A2 SF3B6 SF3B6 SF3B1 SF3B1 SNRPB2 SNRPB2 SNRPD3 SNRPD3 PHF5A PHF5A SF3B5 SF3B5 SNRPA1 SNRPA1 SF3A1 SF3A1 SNRPE SNRPE ENSPTRP00000066188 ENSPTRP00000066188 LOC107969647 LOC107969647 ENSPTRP00000066562 ENSPTRP00000066562 SNRPG SNRPG HTATSF1 HTATSF1 ENSPTRP00000067637 ENSPTRP00000067637 SNRPN SNRPN SNRPD2 SNRPD2 SF3B2 SF3B2 ENSPTRP00000069388 ENSPTRP00000069388 ENSPTRP00000069455 ENSPTRP00000069455 ENSPTRP00000071944 ENSPTRP00000071944 CK820_G0018565 CK820_G0018565 CK820_G0015337 CK820_G0015337 SNRPF-2 SNRPF-2 ENSPTRP00000077950 ENSPTRP00000077950 LOC739651 LOC739651 ENSPTRP00000078631 ENSPTRP00000078631 ENSPTRP00000078900 ENSPTRP00000078900 ENSPTRP00000080859 ENSPTRP00000080859 DDX46 DDX46 ENSPTRP00000082994 ENSPTRP00000082994 SNRPG-2 SNRPG-2 RBMX2 RBMX2 SNRPD1 SNRPD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNIP1Smad nuclear interacting protein 1. (396 aa)
SF3A3Splicing factor 3a, subunit 3, 60kDa. (501 aa)
SF3B4Splicing factor 3b, subunit 4, 49kDa. (424 aa)
BUD13BUD13 isoform 1. (619 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (127 aa)
SF3B3Splicing factor 3b, subunit 3, 130kDa. (1217 aa)
SF3A2Splicing factor 3a, subunit 2, 66kDa. (464 aa)
SF3B6Splicing factor 3B, 14 kDa subunit. (125 aa)
SF3B1Splicing factor 3b, subunit 1, 155kDa. (1267 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PHF5APHD finger protein 5A. (110 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
SF3A1Splicing factor 3a, subunit 1, 120kDa. (793 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSPTRP00000066188annotation not available (193 aa)
LOC107969647Small nuclear ribonucleoprotein E pseudogene. (83 aa)
ENSPTRP00000066562annotation not available (84 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
HTATSF1HIV-1 Tat specific factor 1. (755 aa)
ENSPTRP00000067637annotation not available (92 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein N. (244 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SF3B2Splicing factor 3b, subunit 2, 145kDa. (898 aa)
ENSPTRP00000069388annotation not available (65 aa)
ENSPTRP00000069455annotation not available (428 aa)
ENSPTRP00000071944annotation not available (260 aa)
CK820_G0018565SNRPD1 isoform 2. (117 aa)
CK820_G0015337Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (68 aa)
SNRPF-2Small nuclear ribonucleoprotein polypeptide F. (78 aa)
ENSPTRP00000077950annotation not available (67 aa)
LOC739651U2 small nuclear ribonucleoprotein A' pseudogene. (260 aa)
ENSPTRP00000078631annotation not available (389 aa)
ENSPTRP00000078900annotation not available (71 aa)
ENSPTRP00000080859annotation not available (310 aa)
DDX46DEAD-box helicase 46. (1031 aa)
ENSPTRP00000082994annotation not available (74 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
RBMX2RNA binding motif protein, X-linked 2. (322 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (127 aa)
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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