STRINGSTRING
ENSPTRP00000074297 ENSPTRP00000074297 CSTF2 CSTF2 ZC3H3 ZC3H3 CLP1 CLP1 FIP1L1 FIP1L1 CK820_G0053209 CK820_G0053209 CPSF1 CPSF1 CPSF4 CPSF4 SCAF8 SCAF8 ENSPTRP00000091616 ENSPTRP00000091616 SYMPK SYMPK CK820_G0008138 CK820_G0008138 SSU72P8 SSU72P8 CPSF1-2 CPSF1-2 ENSPTRP00000093260 ENSPTRP00000093260 CSTF1 CSTF1 WDR33 WDR33 CPSF3 CPSF3 CPSF4L CPSF4L NUDT21 NUDT21 CPSF2 CPSF2 CPSF6 CPSF6 PCF11 PCF11 CPSF7 CPSF7 SSU72 SSU72
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPTRP00000074297annotation not available (184 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
ZC3H3Zinc finger CCCH-type containing 3. (952 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
FIP1L1Pre-mRNA 3'-end-processing factor FIP1 isoform X1. (603 aa)
CK820_G0053209T0188532 isoform 1. (194 aa)
CPSF1CPSF1 isoform 10. (1467 aa)
CPSF4Cleavage and polyadenylation specific factor 4, 30kDa. (269 aa)
SCAF8SR-related CTD associated factor 8. (1352 aa)
ENSPTRP00000091616annotation not available (183 aa)
SYMPKSYMPK isoform 3. (1310 aa)
CK820_G0008138CSTF2T isoform 1. (302 aa)
SSU72P8SSU72 pseudogene 8. (194 aa)
CPSF1-2Cleavage and polyadenylation specific factor 1, 160kDa. (1442 aa)
ENSPTRP00000093260annotation not available (603 aa)
CSTF1Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa. (431 aa)
WDR33WD repeat domain 33. (1336 aa)
CPSF3Cleavage and polyadenylation specificity factor 73 kDa subunit. (684 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (179 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF6CPSF6 isoform 3. (589 aa)
PCF11PCF11, cleavage and polyadenylation factor subunit, homolog. (1686 aa)
CPSF7CPSF7 isoform 1. (471 aa)
SSU72SSU72 RNA polymerase II CTD phosphatase homolog. (183 aa)
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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