Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADGRG1 | COL3A1 | ENSPTRP00000054569 | ENSPTRP00000021759 | Adhesion G-protein coupled receptor G1; Receptor involved in cell adhesion and probably in cell-cell interactions. Mediates cell matrix adhesion in developing neurons and hematopoietic stem cells. Receptor for collagen III/COL3A1 in the developing brain and involved in regulation of cortical development, specifically in maintenance of the pial basement membrane integrity and in cortical lamination. Binding to the COL3A1 ligand inhibits neuronal migration and activates the RhoA pathway by coupling to GNA13 and possibly GNA12. Plays a role in the maintenance of hematopoietic stem cells a [...] | Collagen type III alpha 1 chain. | 0.568 |
| ARX | DCX | ENSPTRP00000070708 | ENSPTRP00000067534 | ARX isoform 1. | DCX isoform 5. | 0.402 |
| ARX | PAFAH1B1 | ENSPTRP00000070708 | ENSPTRP00000078363 | ARX isoform 1. | Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] | 0.436 |
| ARX | PLCB1 | ENSPTRP00000070708 | ENSPTRP00000022705 | ARX isoform 1. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. | 0.509 |
| ASCL1 | ATOH1 | ENSPTRP00000077846 | ENSPTRP00000053413 | Achaete-scute family bHLH transcription factor 1. | Protein atonal homolog 1; Transcriptional regulator. Activates E box-dependent transcription in collaboration with TCF3/E47, but the activity is completely antagonized by the negative regulator of neurogenesis HES1. Plays a role in the differentiation of subsets of neural cells by activating E box-dependent transcription (By similarity). | 0.632 |
| ASCL1 | DCX | ENSPTRP00000077846 | ENSPTRP00000067534 | Achaete-scute family bHLH transcription factor 1. | DCX isoform 5. | 0.497 |
| ASCL1 | EOMES | ENSPTRP00000077846 | ENSPTRP00000025366 | Achaete-scute family bHLH transcription factor 1. | EOMES isoform 2. | 0.416 |
| ASCL1 | FOXG1 | ENSPTRP00000077846 | ENSPTRP00000052740 | Achaete-scute family bHLH transcription factor 1. | FOXG1 isoform 8. | 0.635 |
| ASCL1 | LHX2 | ENSPTRP00000077846 | ENSPTRP00000036487 | Achaete-scute family bHLH transcription factor 1. | LHX2 isoform 1. | 0.654 |
| ASCL1 | LHX6 | ENSPTRP00000077846 | ENSPTRP00000085026 | Achaete-scute family bHLH transcription factor 1. | LHX6 isoform 3. | 0.547 |
| ASCL1 | NKX2-1 | ENSPTRP00000077846 | ENSPTRP00000072897 | Achaete-scute family bHLH transcription factor 1. | NKX2-1 isoform 1. | 0.549 |
| ASCL1 | PAX6 | ENSPTRP00000077846 | ENSPTRP00000065705 | Achaete-scute family bHLH transcription factor 1. | PAX6 isoform 13. | 0.590 |
| ASCL1 | POU3F3 | ENSPTRP00000077846 | ENSPTRP00000075044 | Achaete-scute family bHLH transcription factor 1. | POU domain protein. | 0.695 |
| ASCL1 | TBR1 | ENSPTRP00000077846 | ENSPTRP00000046292 | Achaete-scute family bHLH transcription factor 1. | T-box brain transcription factor 1. | 0.473 |
| ASPM | BBS1 | ENSPTRP00000051373 | ENSPTRP00000006768 | Abnormal spindle-like microcephaly-associated protein homolog; Probable role in mitotic spindle regulation and coordination of mitotic processes. May have a preferential role in regulating neurogenesis (By similarity). | Bardet-Biedl syndrome 1 protein isoform X1. | 0.412 |
| ASPM | FOXP2 | ENSPTRP00000051373 | ENSPTRP00000071606 | Abnormal spindle-like microcephaly-associated protein homolog; Probable role in mitotic spindle regulation and coordination of mitotic processes. May have a preferential role in regulating neurogenesis (By similarity). | Forkhead box protein P2; Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Plays a role in synapse formation by regulating SRPX2 levels (By similarity). | 0.854 |
| ASPM | KIF14 | ENSPTRP00000051373 | ENSPTRP00000003041 | Abnormal spindle-like microcephaly-associated protein homolog; Probable role in mitotic spindle regulation and coordination of mitotic processes. May have a preferential role in regulating neurogenesis (By similarity). | Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.950 |
| ASPM | MCPH1 | ENSPTRP00000051373 | ENSPTRP00000093442 | Abnormal spindle-like microcephaly-associated protein homolog; Probable role in mitotic spindle regulation and coordination of mitotic processes. May have a preferential role in regulating neurogenesis (By similarity). | Microcephalin; Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex (By similarity). | 0.929 |
| ASPM | NDE1 | ENSPTRP00000051373 | ENSPTRP00000073816 | Abnormal spindle-like microcephaly-associated protein homolog; Probable role in mitotic spindle regulation and coordination of mitotic processes. May have a preferential role in regulating neurogenesis (By similarity). | NudE nuclear distribution gene E homolog 1. | 0.531 |
| ASPM | NF1 | ENSPTRP00000051373 | ENSPTRP00000015312 | Abnormal spindle-like microcephaly-associated protein homolog; Probable role in mitotic spindle regulation and coordination of mitotic processes. May have a preferential role in regulating neurogenesis (By similarity). | Neurofibromin 1. | 0.435 |
page 1 of 31