17 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPTRP00000083313	annotation not available (104 aa)
	ARID1A	AT rich interactive domain 1A (SWI-like). (2287 aa)
	WBP2	WW domain-binding protein 2. (261 aa)
	PHF2	PHF2 isoform 1. (1080 aa)
	H2AFY	H2AFY isoform 4. (372 aa)
	CHEK1	CHEK1 isoform 10. (485 aa)
	ENSPTRP00000069128	annotation not available (157 aa)
	SMARCD1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (515 aa)
	LOC461237	FAM47E isoform 6. (408 aa)
	KAT2B	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (832 aa)
	EP300	E1A binding protein p300. (2175 aa)
	PABPC1L	Poly(A) binding protein cytoplasmic 1 like. (330 aa)
	SPHK2	Sphingosine kinase 2. (255 aa)
	PADI2	Peptidyl arginine deiminase 2. (665 aa)
	VPS72	Vacuolar protein sorting 72 homolog. (375 aa)
	ARID1B	ARID1B isoform 2. (2422 aa)
	CK820_G0020029	PABPC1L isoform 9. (171 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID1A	ARID1B	ENSPTRP00000086363	ENSPTRP00000079430	AT rich interactive domain 1A (SWI-like).	ARID1B isoform 2.	0.997
ARID1A	EP300	ENSPTRP00000086363	ENSPTRP00000024841	AT rich interactive domain 1A (SWI-like).	E1A binding protein p300.	0.715
ARID1A	SMARCD1	ENSPTRP00000086363	ENSPTRP00000071433	AT rich interactive domain 1A (SWI-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.999
ARID1B	ARID1A	ENSPTRP00000079430	ENSPTRP00000086363	ARID1B isoform 2.	AT rich interactive domain 1A (SWI-like).	0.997
ARID1B	EP300	ENSPTRP00000079430	ENSPTRP00000024841	ARID1B isoform 2.	E1A binding protein p300.	0.512
ARID1B	SMARCD1	ENSPTRP00000079430	ENSPTRP00000071433	ARID1B isoform 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.986
EP300	ARID1A	ENSPTRP00000024841	ENSPTRP00000086363	E1A binding protein p300.	AT rich interactive domain 1A (SWI-like).	0.715
EP300	ARID1B	ENSPTRP00000024841	ENSPTRP00000079430	E1A binding protein p300.	ARID1B isoform 2.	0.512
EP300	KAT2B	ENSPTRP00000024841	ENSPTRP00000025331	E1A binding protein p300.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.999
KAT2B	EP300	ENSPTRP00000025331	ENSPTRP00000024841	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	E1A binding protein p300.	0.999
SMARCD1	ARID1A	ENSPTRP00000071433	ENSPTRP00000086363	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	AT rich interactive domain 1A (SWI-like).	0.999
SMARCD1	ARID1B	ENSPTRP00000071433	ENSPTRP00000079430	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	ARID1B isoform 2.	0.986