41 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRIOBP	TRIOBP isoform 1. (2139 aa)
	GRXCR1	Glutaredoxin and cysteine rich domain containing 1. (290 aa)
	IFT27	Intraflagellar transport 27 homolog. (186 aa)
	PJVK	DFNB59 isoform 1. (352 aa)
	USH1C	USH1C isoform 4. (899 aa)
	TSKU	Tsukushi, small leucine rich proteoglycan. (353 aa)
	GRXCR2	GRXCR2 isoform 1. (248 aa)
	IFT88	Intraflagellar transport 88. (833 aa)
	TRIP11	TRIP11 isoform 1. (1979 aa)
	STRC	LOW QUALITY PROTEIN: stereocilin. (1772 aa)
	MKS1	MKS transition zone complex subunit 1. (559 aa)
	SLC9A3R1	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. (358 aa)
	USH1G	USH1 protein network component sans. (461 aa)
	SOD1	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family. (154 aa)
	PLS1	Plastin 1 (I isoform). (629 aa)
	SEC24B	SEC24B isoform 1. (1286 aa)
	ADGRV1	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family. (6306 aa)
	LRRC1	Leucine rich repeat containing 1. (524 aa)
	CTHRC1	Collagen triple helix repeat containing 1. (243 aa)
	TPRN	TPRN isoform 2. (634 aa)
	REST	RE1 silencing transcription factor. (1097 aa)
	HES5	Hes family bHLH transcription factor 5. (165 aa)
	SCRIB	SCRIB isoform 8. (959 aa)
	CDH23	CDH23 isoform 1. (3359 aa)
	CLRN2	CLRN2 isoform 1. (232 aa)
	HES1	Hes family bHLH transcription factor 1. (280 aa)
	LOC742658	Stereocilin-like. (1726 aa)
	LHFPL5	LHFPL tetraspan subfamily member 5. (219 aa)
	TTC8	Tetratricopeptide repeat domain 8. (531 aa)
	WHRN	WHRN isoform 2. (907 aa)
	CLRN1	T0022075 isoform 1. (245 aa)
	MYO7A	MYO7A isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2222 aa)
	IFT20	IFT20 isoform 5. (164 aa)
	CECR2	CECR2 isoform 2. (1485 aa)
	PCDH15	Protocadherin related 15. (1954 aa)
	HES5-2	Hes family bHLH transcription factor 5. (165 aa)
	SDC4	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (198 aa)
	ENSPTRP00000085692	annotation not available (679 aa)
	PDZD7	PDZD7 isoform 1. (1035 aa)
	TSHR	Thyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. (764 aa)
	SCRIB-2	Scribbled homolog. (1662 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRV1	CDH23	ENSPTRP00000029219	ENSPTRP00000062906	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	CDH23 isoform 1.	0.807
ADGRV1	CLRN1	ENSPTRP00000029219	ENSPTRP00000068787	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	T0022075 isoform 1.	0.670
ADGRV1	GRXCR1	ENSPTRP00000029219	ENSPTRP00000057705	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	Glutaredoxin and cysteine rich domain containing 1.	0.480
ADGRV1	LHFPL5	ENSPTRP00000029219	ENSPTRP00000066441	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	LHFPL tetraspan subfamily member 5.	0.493
ADGRV1	MYO7A	ENSPTRP00000029219	ENSPTRP00000076334	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	MYO7A isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.786
ADGRV1	PCDH15	ENSPTRP00000029219	ENSPTRP00000078994	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	Protocadherin related 15.	0.785
ADGRV1	PDZD7	ENSPTRP00000029219	ENSPTRP00000087414	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	PDZD7 isoform 1.	0.815
ADGRV1	USH1C	ENSPTRP00000029219	ENSPTRP00000048221	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	USH1C isoform 4.	0.807
ADGRV1	USH1G	ENSPTRP00000029219	ENSPTRP00000016349	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	USH1 protein network component sans.	0.767
ADGRV1	WHRN	ENSPTRP00000029219	ENSPTRP00000068184	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	WHRN isoform 2.	0.946
CDH23	ADGRV1	ENSPTRP00000062906	ENSPTRP00000029219	CDH23 isoform 1.	ADGRV1 isoform 1; Belongs to the G-protein coupled receptor 2 family.	0.807
CDH23	CLRN1	ENSPTRP00000062906	ENSPTRP00000068787	CDH23 isoform 1.	T0022075 isoform 1.	0.798
CDH23	ENSPTRP00000085692	ENSPTRP00000062906	ENSPTRP00000085692	CDH23 isoform 1.	annotation not available	0.509
CDH23	GRXCR1	ENSPTRP00000062906	ENSPTRP00000057705	CDH23 isoform 1.	Glutaredoxin and cysteine rich domain containing 1.	0.711
CDH23	LHFPL5	ENSPTRP00000062906	ENSPTRP00000066441	CDH23 isoform 1.	LHFPL tetraspan subfamily member 5.	0.668
CDH23	LOC742658	ENSPTRP00000062906	ENSPTRP00000065818	CDH23 isoform 1.	Stereocilin-like.	0.418
CDH23	MYO7A	ENSPTRP00000062906	ENSPTRP00000076334	CDH23 isoform 1.	MYO7A isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.954
CDH23	PCDH15	ENSPTRP00000062906	ENSPTRP00000078994	CDH23 isoform 1.	Protocadherin related 15.	0.993
CDH23	PDZD7	ENSPTRP00000062906	ENSPTRP00000087414	CDH23 isoform 1.	PDZD7 isoform 1.	0.663
CDH23	PJVK	ENSPTRP00000062906	ENSPTRP00000049012	CDH23 isoform 1.	DFNB59 isoform 1.	0.463