10 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBS1	Bardet-Biedl syndrome 1 protein isoform X1. (593 aa)
	CCSAP	Centriole, cilia and spindle associated protein. (275 aa)
	CATSPER1	Cation channel sperm associated 1. (780 aa)
	BBS2	Bardet-Biedl syndrome 2 protein homolog. (721 aa)
	CFAP20	Cilia and flagella associated protein 20. (193 aa)
	TTLL6	Tubulin tyrosine ligase like 6. (891 aa)
	GAS2L2	Growth arrest specific 2 like 2. (880 aa)
	CFAP45	CFAP45 isoform 3. (551 aa)
	BBS4	Bardet-Biedl syndrome 4. (519 aa)
	MKKS	McKusick-Kaufman syndrome. (570 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS1	BBS2	ENSPTRP00000006768	ENSPTRP00000013880	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 2 protein homolog.	0.999
BBS1	BBS4	ENSPTRP00000006768	ENSPTRP00000057396	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 4.	0.999
BBS1	MKKS	ENSPTRP00000006768	ENSPTRP00000022725	Bardet-Biedl syndrome 1 protein isoform X1.	McKusick-Kaufman syndrome.	0.421
BBS2	BBS1	ENSPTRP00000013880	ENSPTRP00000006768	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 1 protein isoform X1.	0.999
BBS2	BBS4	ENSPTRP00000013880	ENSPTRP00000057396	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 4.	0.999
BBS2	MKKS	ENSPTRP00000013880	ENSPTRP00000022725	Bardet-Biedl syndrome 2 protein homolog.	McKusick-Kaufman syndrome.	0.527
BBS4	BBS1	ENSPTRP00000057396	ENSPTRP00000006768	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 1 protein isoform X1.	0.999
BBS4	BBS2	ENSPTRP00000057396	ENSPTRP00000013880	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 2 protein homolog.	0.999
CFAP20	CFAP45	ENSPTRP00000013958	ENSPTRP00000077906	Cilia and flagella associated protein 20.	CFAP45 isoform 3.	0.770
CFAP45	CFAP20	ENSPTRP00000077906	ENSPTRP00000013958	CFAP45 isoform 3.	Cilia and flagella associated protein 20.	0.770
MKKS	BBS1	ENSPTRP00000022725	ENSPTRP00000006768	McKusick-Kaufman syndrome.	Bardet-Biedl syndrome 1 protein isoform X1.	0.421
MKKS	BBS2	ENSPTRP00000022725	ENSPTRP00000013880	McKusick-Kaufman syndrome.	Bardet-Biedl syndrome 2 protein homolog.	0.527