9 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCF21	Transcription factor 21. (179 aa)
	AMER1	APC membrane recruitment protein 1. (805 aa)
	BMP4	Bone morphogenetic protein 4. (408 aa)
	OSR1	Odd-skipped related transcription factor 1. (266 aa)
	PAX2	PAX2 isoform 1. (417 aa)
	STAT1	Signal transducer and activator of transcription. (758 aa)
	BMP4-2	Bone morphogenetic protein 4. (408 aa)
	WNT4	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (351 aa)
	SIX2	SIX homeobox 2. (291 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PAX2	SIX2	ENSPTRP00000091068	ENSPTRP00000020407	PAX2 isoform 1.	SIX homeobox 2.	0.657
PAX2	WNT4	ENSPTRP00000091068	ENSPTRP00000063328	PAX2 isoform 1.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.472
SIX2	PAX2	ENSPTRP00000020407	ENSPTRP00000091068	SIX homeobox 2.	PAX2 isoform 1.	0.657
SIX2	WNT4	ENSPTRP00000020407	ENSPTRP00000063328	SIX homeobox 2.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.476
WNT4	PAX2	ENSPTRP00000063328	ENSPTRP00000091068	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	PAX2 isoform 1.	0.472
WNT4	SIX2	ENSPTRP00000063328	ENSPTRP00000020407	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	SIX homeobox 2.	0.476