(13 nodes) Regulation of postsynaptic density assembly network (Pan troglodytes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABI3	ABI3 isoform 1. (366 aa)
	NPTX1	Neuronal pentraxin 1. (432 aa)
	PTPRS	Protein tyrosine phosphatase receptor type S. (1948 aa)
	LRFN1	Leucine rich repeat and fibronectin type III domain containing 1. (771 aa)
	LRRC4B	LRRC4B isoform 1. (715 aa)
	LRRTM2	Leucine rich repeat transmembrane neuronal 2. (516 aa)
	PTPRD	PTPRD isoform 2. (1801 aa)
	LRFN4	Leucine rich repeat and fibronectin type III domain containing 4. (635 aa)
	CBLN1	Cerebellin 1 precursor. (193 aa)
	NRXN1	NRXN1 isoform 9. (1547 aa)
	GRID2	Glutamate ionotropic receptor delta type subunit 2. (1007 aa)
	IL1RAP	Interleukin 1 receptor accessory protein. (687 aa)
	ENSPTRP00000085189	annotation not available (1896 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBLN1	GRID2	ENSPTRP00000013823	ENSPTRP00000083033	Cerebellin 1 precursor.	Glutamate ionotropic receptor delta type subunit 2.	0.900
CBLN1	LRRTM2	ENSPTRP00000013823	ENSPTRP00000029568	Cerebellin 1 precursor.	Leucine rich repeat transmembrane neuronal 2.	0.483
CBLN1	NRXN1	ENSPTRP00000013823	ENSPTRP00000073023	Cerebellin 1 precursor.	NRXN1 isoform 9.	0.894
ENSPTRP00000085189	IL1RAP	ENSPTRP00000085189	ENSPTRP00000083273	annotation not available	Interleukin 1 receptor accessory protein.	0.862
ENSPTRP00000085189	LRFN1	ENSPTRP00000085189	ENSPTRP00000018786	annotation not available	Leucine rich repeat and fibronectin type III domain containing 1.	0.622
ENSPTRP00000085189	LRFN4	ENSPTRP00000085189	ENSPTRP00000059190	annotation not available	Leucine rich repeat and fibronectin type III domain containing 4.	0.733
ENSPTRP00000085189	LRRC4B	ENSPTRP00000085189	ENSPTRP00000019491	annotation not available	LRRC4B isoform 1.	0.790
ENSPTRP00000085189	NRXN1	ENSPTRP00000085189	ENSPTRP00000073023	annotation not available	NRXN1 isoform 9.	0.485
GRID2	CBLN1	ENSPTRP00000083033	ENSPTRP00000013823	Glutamate ionotropic receptor delta type subunit 2.	Cerebellin 1 precursor.	0.900
GRID2	NRXN1	ENSPTRP00000083033	ENSPTRP00000073023	Glutamate ionotropic receptor delta type subunit 2.	NRXN1 isoform 9.	0.791
IL1RAP	ENSPTRP00000085189	ENSPTRP00000083273	ENSPTRP00000085189	Interleukin 1 receptor accessory protein.	annotation not available	0.862
IL1RAP	LRFN4	ENSPTRP00000083273	ENSPTRP00000059190	Interleukin 1 receptor accessory protein.	Leucine rich repeat and fibronectin type III domain containing 4.	0.472
IL1RAP	LRRC4B	ENSPTRP00000083273	ENSPTRP00000019491	Interleukin 1 receptor accessory protein.	LRRC4B isoform 1.	0.457
IL1RAP	PTPRD	ENSPTRP00000083273	ENSPTRP00000049466	Interleukin 1 receptor accessory protein.	PTPRD isoform 2.	0.978
IL1RAP	PTPRS	ENSPTRP00000083273	ENSPTRP00000017562	Interleukin 1 receptor accessory protein.	Protein tyrosine phosphatase receptor type S.	0.862
LRFN1	ENSPTRP00000085189	ENSPTRP00000018786	ENSPTRP00000085189	Leucine rich repeat and fibronectin type III domain containing 1.	annotation not available	0.622
LRFN1	PTPRD	ENSPTRP00000018786	ENSPTRP00000049466	Leucine rich repeat and fibronectin type III domain containing 1.	PTPRD isoform 2.	0.746
LRFN1	PTPRS	ENSPTRP00000018786	ENSPTRP00000017562	Leucine rich repeat and fibronectin type III domain containing 1.	Protein tyrosine phosphatase receptor type S.	0.622
LRFN4	ENSPTRP00000085189	ENSPTRP00000059190	ENSPTRP00000085189	Leucine rich repeat and fibronectin type III domain containing 4.	annotation not available	0.733
LRFN4	IL1RAP	ENSPTRP00000059190	ENSPTRP00000083273	Leucine rich repeat and fibronectin type III domain containing 4.	Interleukin 1 receptor accessory protein.	0.472