(25 nodes) Synaptic membrane adhesion network (Pan troglodytes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL1RAP	Interleukin 1 receptor accessory protein. (687 aa)
	NRG1	NRG1 isoform 3. (713 aa)
	NTNG2	NTNG2 isoform 1. (530 aa)
	SLITRK2-2	SLIT and NTRK like family member 2. (845 aa)
	ENSPTRP00000085189	annotation not available (1896 aa)
	NTNG1	NTNG1 isoform 2. (540 aa)
	SLITRK2	SLITRK2 isoform 2. (845 aa)
	PTPRF	Protein tyrosine phosphatase, receptor type, F. (1914 aa)
	NRXN1	NRXN1 isoform 9. (1547 aa)
	LRFN5	Leucine rich repeat and fibronectin type III domain containing 5. (726 aa)
	LRFN4	Leucine rich repeat and fibronectin type III domain containing 4. (635 aa)
	PCDH17	PCDH17 isoform 1. (1187 aa)
	PTPRD	PTPRD isoform 2. (1801 aa)
	GPC4	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (556 aa)
	LRRC4	Leucine rich repeat containing 4. (633 aa)
	EFNA5	EFNA5 isoform 1; Belongs to the ephrin family. (228 aa)
	SPARCL1	SPARCL1 isoform 2. (664 aa)
	SLITRK3	SLITRK3 isoform 2. (977 aa)
	FLRT3	Fibronectin leucine rich transmembrane protein 3. (649 aa)
	LRRC4B	LRRC4B isoform 1. (715 aa)
	LRFN3	Leucine rich repeat and fibronectin type III domain containing 3. (628 aa)
	PTPRS	Protein tyrosine phosphatase receptor type S. (1948 aa)
	GPC6	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
	SLITRK1	SLITRK1 isoform 1. (580 aa)
	LRRC4C	Leucine rich repeat containing 4C. (640 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPTRP00000085189	GPC4	ENSPTRP00000085189	ENSPTRP00000038388	annotation not available	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.449
ENSPTRP00000085189	IL1RAP	ENSPTRP00000085189	ENSPTRP00000083273	annotation not available	Interleukin 1 receptor accessory protein.	0.862
ENSPTRP00000085189	LRFN3	ENSPTRP00000085189	ENSPTRP00000018633	annotation not available	Leucine rich repeat and fibronectin type III domain containing 3.	0.616
ENSPTRP00000085189	LRFN4	ENSPTRP00000085189	ENSPTRP00000059190	annotation not available	Leucine rich repeat and fibronectin type III domain containing 4.	0.733
ENSPTRP00000085189	LRFN5	ENSPTRP00000085189	ENSPTRP00000061521	annotation not available	Leucine rich repeat and fibronectin type III domain containing 5.	0.740
ENSPTRP00000085189	LRRC4	ENSPTRP00000085189	ENSPTRP00000033656	annotation not available	Leucine rich repeat containing 4.	0.611
ENSPTRP00000085189	LRRC4B	ENSPTRP00000085189	ENSPTRP00000019491	annotation not available	LRRC4B isoform 1.	0.790
ENSPTRP00000085189	LRRC4C	ENSPTRP00000085189	ENSPTRP00000006103	annotation not available	Leucine rich repeat containing 4C.	0.622
ENSPTRP00000085189	NRXN1	ENSPTRP00000085189	ENSPTRP00000073023	annotation not available	NRXN1 isoform 9.	0.485
ENSPTRP00000085189	SLITRK1	ENSPTRP00000085189	ENSPTRP00000010123	annotation not available	SLITRK1 isoform 1.	0.839
ENSPTRP00000085189	SLITRK2	ENSPTRP00000085189	ENSPTRP00000079242	annotation not available	SLITRK2 isoform 2.	0.676
ENSPTRP00000085189	SLITRK2-2	ENSPTRP00000085189	ENSPTRP00000086737	annotation not available	SLIT and NTRK like family member 2.	0.676
ENSPTRP00000085189	SLITRK3	ENSPTRP00000085189	ENSPTRP00000026832	annotation not available	SLITRK3 isoform 2.	0.664
GPC4	ENSPTRP00000085189	ENSPTRP00000038388	ENSPTRP00000085189	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	annotation not available	0.449
GPC4	GPC6	ENSPTRP00000038388	ENSPTRP00000010132	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.825
GPC4	PTPRS	ENSPTRP00000038388	ENSPTRP00000017562	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Protein tyrosine phosphatase receptor type S.	0.449
GPC4	SPARCL1	ENSPTRP00000038388	ENSPTRP00000027929	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	SPARCL1 isoform 2.	0.414
GPC6	GPC4	ENSPTRP00000010132	ENSPTRP00000038388	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.825
GPC6	PTPRD	ENSPTRP00000010132	ENSPTRP00000049466	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	PTPRD isoform 2.	0.422
IL1RAP	ENSPTRP00000085189	ENSPTRP00000083273	ENSPTRP00000085189	Interleukin 1 receptor accessory protein.	annotation not available	0.862