STRINGSTRING
SF3B4 SF3B4 ZCRB1 ZCRB1 SNRPF SNRPF SNRNP25 SNRNP25 SF3B3 SF3B3 SF3B6 SF3B6 ZMAT5 ZMAT5 PHF5A PHF5A DHX15 DHX15 SF3B5 SF3B5 RNPC3 RNPC3 RBM41 RBM41 SNRNP35 SNRNP35 SNRPE SNRPE PDCD7 PDCD7 LOC107969647 LOC107969647 ENSPTRP00000066562 ENSPTRP00000066562 ENSPTRP00000066742 ENSPTRP00000066742 SNRPG SNRPG ENSPTRP00000067637 ENSPTRP00000067637 SNRPD2 SNRPD2 SF3B2 SF3B2 CK820_G0015337 CK820_G0015337 SNRPF-2 SNRPF-2 ENSPTRP00000077950 ENSPTRP00000077950 ENSPTRP00000078631 ENSPTRP00000078631 ENSPTRP00000078900 ENSPTRP00000078900 ENSPTRP00000082994 ENSPTRP00000082994 SNRNP48 SNRNP48 SNRPG-2 SNRPG-2 ENSPTRP00000087648 ENSPTRP00000087648
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3B4Splicing factor 3b, subunit 4, 49kDa. (424 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif containing 1. (217 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (127 aa)
SNRNP25Small nuclear ribonucleoprotein U11/U12 subunit 25. (132 aa)
SF3B3Splicing factor 3b, subunit 3, 130kDa. (1217 aa)
SF3B6Splicing factor 3B, 14 kDa subunit. (125 aa)
ZMAT5Zinc finger, matrin-type 5. (170 aa)
PHF5APHD finger protein 5A. (110 aa)
DHX15DEAH (Asp-Glu-Ala-His) box polypeptide 15. (795 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
RNPC3RNA-binding region (RNP1, RRM) containing 3. (517 aa)
RBM41RNA binding motif protein 41. (470 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (251 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
PDCD7Programmed cell death 7. (485 aa)
LOC107969647Small nuclear ribonucleoprotein E pseudogene. (83 aa)
ENSPTRP00000066562annotation not available (84 aa)
ENSPTRP00000066742annotation not available (458 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
ENSPTRP00000067637annotation not available (92 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SF3B2Splicing factor 3b, subunit 2, 145kDa. (898 aa)
CK820_G0015337Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (68 aa)
SNRPF-2Small nuclear ribonucleoprotein polypeptide F. (78 aa)
ENSPTRP00000077950annotation not available (67 aa)
ENSPTRP00000078631annotation not available (389 aa)
ENSPTRP00000078900annotation not available (71 aa)
ENSPTRP00000082994annotation not available (74 aa)
SNRNP48Small nuclear ribonucleoprotein U11/U12 subunit 48. (339 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
ENSPTRP00000087648annotation not available (200 aa)
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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