40 items (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3983 aa)
	ATAD2	ATAD2 isoform 1. (1391 aa)
	BRD3	Bromodomain containing 3. (726 aa)
	PBRM1	PBRM1 isoform 17. (1690 aa)
	ZMYND11	Zinc finger, MYND-type containing 11. (648 aa)
	TRIM24-2	Tripartite motif containing 24. (1050 aa)
	SMARCA2	SMARCA2 isoform 11. (1588 aa)
	BRPF3	Bromodomain and PHD finger containing, 3. (1205 aa)
	BRDT	Bromodomain testis associated. (947 aa)
	SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1679 aa)
	BAZ2B	BAZ2B isoform 2. (2167 aa)
	ATAD2B	ATPase family, AAA domain containing 2B. (1458 aa)
	BAZ1B	Bromodomain adjacent to zinc finger domain, 1B. (1484 aa)
	PHIP	PHIP isoform 1. (1823 aa)
	BPTF	BPTF isoform 2. (3043 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain 1A. (1556 aa)
	ASH1L	ASH1 like histone lysine methyltransferase. (2969 aa)
	BRD7	Bromodomain containing 7. (652 aa)
	BAZ2A	BAZ2A isoform 2. (1906 aa)
	SP140L	SP140 nuclear body protein like. (580 aa)
	SP100	Nuclear autoantigen Sp-100. (885 aa)
	TRIM33	Tripartite motif containing 33. (1127 aa)
	TRIM66	Tripartite motif containing 66. (1245 aa)
	BRPF1	Bromodomain and PHD finger containing, 1. (1253 aa)
	CREBBP	CREB binding protein. (2442 aa)
	SP140	SP140 nuclear body protein. (866 aa)
	TAF1	Transcription initiation factor TFIID subunit. (1927 aa)
	BRWD3	Bromodomain and WD repeat domain containing 3. (1802 aa)
	BRD2	Bromodomain containing 2. (835 aa)
	BRD4	Bromodomain containing 4. (1362 aa)
	BRD1	Bromodomain containing 1. (1189 aa)
	BRD9	BRD9 isoform 8. (600 aa)
	TAF1L	Transcription initiation factor TFIID subunit. (1870 aa)
	BRD8	Bromodomain containing 8. (1235 aa)
	LOC738370	Bromodomain containing 9. (596 aa)
	KAT2B	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (832 aa)
	EP300	E1A binding protein p300. (2175 aa)
	BRWD1	Bromodomain and WD repeat domain containing 1. (2320 aa)
	ZMYND8	ZMYND8 isoform 21. (1241 aa)
	CECR2	CECR2 isoform 2. (1485 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASH1L	BPTF	ENSPTRP00000002411	ENSPTRP00000016254	ASH1 like histone lysine methyltransferase.	BPTF isoform 2.	0.616
ASH1L	BRD1	ENSPTRP00000002411	ENSPTRP00000088951	ASH1 like histone lysine methyltransferase.	Bromodomain containing 1.	0.441
ASH1L	CREBBP	ENSPTRP00000002411	ENSPTRP00000074980	ASH1 like histone lysine methyltransferase.	CREB binding protein.	0.467
ASH1L	EP300	ENSPTRP00000002411	ENSPTRP00000024841	ASH1 like histone lysine methyltransferase.	E1A binding protein p300.	0.472
ASH1L	KMT2A	ENSPTRP00000002411	ENSPTRP00000078954	ASH1 like histone lysine methyltransferase.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.637
ATAD2	BAZ2B	ENSPTRP00000035148	ENSPTRP00000021476	ATAD2 isoform 1.	BAZ2B isoform 2.	0.422
ATAD2	BRD4	ENSPTRP00000035148	ENSPTRP00000089214	ATAD2 isoform 1.	Bromodomain containing 4.	0.541
ATAD2	CECR2	ENSPTRP00000035148	ENSPTRP00000078229	ATAD2 isoform 1.	CECR2 isoform 2.	0.492
ATAD2B	BRWD3	ENSPTRP00000020103	ENSPTRP00000090129	ATPase family, AAA domain containing 2B.	Bromodomain and WD repeat domain containing 3.	0.403
ATAD2B	CECR2	ENSPTRP00000020103	ENSPTRP00000078229	ATPase family, AAA domain containing 2B.	CECR2 isoform 2.	0.475
ATAD2B	PHIP	ENSPTRP00000020103	ENSPTRP00000031388	ATPase family, AAA domain containing 2B.	PHIP isoform 1.	0.614
BAZ1A	BAZ1B	ENSPTRP00000010622	ENSPTRP00000032930	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain adjacent to zinc finger domain, 1B.	0.808
BAZ1A	BPTF	ENSPTRP00000010622	ENSPTRP00000016254	Bromodomain adjacent to zinc finger domain 1A.	BPTF isoform 2.	0.618
BAZ1A	CECR2	ENSPTRP00000010622	ENSPTRP00000078229	Bromodomain adjacent to zinc finger domain 1A.	CECR2 isoform 2.	0.777
BAZ1A	EP300	ENSPTRP00000010622	ENSPTRP00000024841	Bromodomain adjacent to zinc finger domain 1A.	E1A binding protein p300.	0.416
BAZ1A	KAT2B	ENSPTRP00000010622	ENSPTRP00000025331	Bromodomain adjacent to zinc finger domain 1A.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.407
BAZ1A	SMARCA2	ENSPTRP00000010622	ENSPTRP00000062652	Bromodomain adjacent to zinc finger domain 1A.	SMARCA2 isoform 11.	0.647
BAZ1A	SMARCA4	ENSPTRP00000010622	ENSPTRP00000073124	Bromodomain adjacent to zinc finger domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.618
BAZ1B	BAZ1A	ENSPTRP00000032930	ENSPTRP00000010622	Bromodomain adjacent to zinc finger domain, 1B.	Bromodomain adjacent to zinc finger domain 1A.	0.808
BAZ1B	BAZ2A	ENSPTRP00000032930	ENSPTRP00000083735	Bromodomain adjacent to zinc finger domain, 1B.	BAZ2A isoform 2.	0.530