STRINGSTRING
VIM VIM GAS2 GAS2 MAPT MAPT CAPG CAPG CASP8 CASP8 ADD1 ADD1 CASP7 CASP7 SCIN-2 SCIN-2 SH3GLB1 SH3GLB1 SH3GLB2-2 SH3GLB2-2 ENSPTRP00000086277 ENSPTRP00000086277 ENSPTRP00000086254 ENSPTRP00000086254 CASP6 CASP6 DBNL-2 DBNL-2 SCIN SCIN DBNL DBNL PLEC PLEC GSN GSN MAP2 MAP2 TMEM198 TMEM198 CASP3 CASP3 SPTAN1 SPTAN1 SH3GLB2 SH3GLB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VIMVimentin; Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either laterally or terminally. (466 aa)
GAS2GAS2 isoform 1. (314 aa)
MAPTMicrotubule-associated protein tau; Promotes microtubule assembly and stability, and might be involved in the establishment and maintenance of neuronal polarity. The C-terminus binds axonal microtubules while the N-terminus binds neural plasma membrane components, suggesting that tau functions as a linker protein between both. Axonal polarity is predetermined by tau localization (in the neuronal cell) in the domain of the cell body defined by the centrosome. The short isoforms allow plasticity of the cytoskeleton whereas the longer isoforms may preferentially play a role in its stabili [...] (776 aa)
CAPGCapping actin protein, gelsolin like. (348 aa)
CASP8Caspase 8, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (538 aa)
ADD1ADD1 isoform 5. (768 aa)
CASP7CASP7 isoform 1; Belongs to the peptidase C14A family. (388 aa)
SCIN-2SCIN isoform 2. (715 aa)
SH3GLB1SH3 domain containing GRB2 like, endophilin B1. (394 aa)
SH3GLB2-2SH3 domain containing GRB2 like, endophilin B2. (404 aa)
ENSPTRP00000086277annotation not available (106 aa)
ENSPTRP00000086254Microtubule-associated protein tau. (776 aa)
CASP6Caspase 6, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (293 aa)
DBNL-2Drebrin like. (439 aa)
SCINSCIN isoform 3. (715 aa)
DBNLDBNL isoform 5. (439 aa)
PLECPLEC isoform 2. (4684 aa)
GSNGSN isoform 3. (782 aa)
MAP2Microtubule-associated protein. (1827 aa)
TMEM198Transmembrane protein 198. (360 aa)
CASP3Caspase-3 subunit p12; Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop-helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Involved in the cleavage of huntingtin. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity). Belongs to the peptidase C14A family. (277 aa)
SPTAN1SPTAN1 isoform 9. (2498 aa)
SH3GLB2SH3GLB2 isoform 7. (389 aa)
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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