Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APOE | EGFR | ENSPTRP00000054411 | ENSPTRP00000069741 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | Receptor protein-tyrosine kinase. | 0.593 |
| APOE | EP300 | ENSPTRP00000054411 | ENSPTRP00000024841 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | E1A binding protein p300. | 0.563 |
| APOE | TFAP2A | ENSPTRP00000054411 | ENSPTRP00000087495 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | Transcription factor AP-2 alpha. | 0.637 |
| ATAD2 | ESR1 | ENSPTRP00000035148 | ENSPTRP00000031932 | ATAD2 isoform 1. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.953 |
| ATAD2 | MYC | ENSPTRP00000035148 | ENSPTRP00000075568 | ATAD2 isoform 1. | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). | 0.453 |
| ATAD2B | ESR1 | ENSPTRP00000020103 | ENSPTRP00000031932 | ATPase family, AAA domain containing 2B. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.654 |
| CDKN1A | CREBBP | ENSPTRP00000060292 | ENSPTRP00000074980 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | CREB binding protein. | 0.844 |
| CDKN1A | EGFR | ENSPTRP00000060292 | ENSPTRP00000069741 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | Receptor protein-tyrosine kinase. | 0.585 |
| CDKN1A | EP300 | ENSPTRP00000060292 | ENSPTRP00000024841 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | E1A binding protein p300. | 0.855 |
| CDKN1A | ERBB2 | ENSPTRP00000060292 | ENSPTRP00000069840 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | Receptor protein-tyrosine kinase. | 0.478 |
| CDKN1A | ESR1 | ENSPTRP00000060292 | ENSPTRP00000031932 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.695 |
| CDKN1A | KIT | ENSPTRP00000060292 | ENSPTRP00000027637 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | Mast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.409 |
| CDKN1A | MYC | ENSPTRP00000060292 | ENSPTRP00000075568 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). | 0.802 |
| CDKN1A | TFAP2A | ENSPTRP00000060292 | ENSPTRP00000087495 | Cyclin-dependent kinase inhibitor 1A (P21, Cip1). | Transcription factor AP-2 alpha. | 0.657 |
| CGA | CK820_G0042350 | ENSPTRP00000088679 | ENSPTRP00000054024 | Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family. | CGB7 isoform 1. | 0.962 |
| CGA | ENSPTRP00000048563 | ENSPTRP00000088679 | ENSPTRP00000048563 | Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family. | annotation not available | 0.962 |
| CGA | ENSPTRP00000054347 | ENSPTRP00000088679 | ENSPTRP00000054347 | Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family. | annotation not available | 0.962 |
| CGA | LOC107973292 | ENSPTRP00000088679 | ENSPTRP00000048561 | Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family. | Choriogonadotropin subunit beta 7. | 0.962 |
| CITED1 | CREBBP | ENSPTRP00000037868 | ENSPTRP00000074980 | Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1. | CREB binding protein. | 0.701 |
| CITED1 | EP300 | ENSPTRP00000037868 | ENSPTRP00000024841 | Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1. | E1A binding protein p300. | 0.962 |
page 1 of 28