(20 nodes) Proteasome subunit network (Pan troglodytes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMA1	Proteasome subunit alpha type. (269 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMA4	Proteasome subunit alpha type-4 isoform X2. (261 aa)
	PSMA8	Proteasome subunit alpha type. (256 aa)
	PSMA7	Proteasome subunit alpha type. (248 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	PSMB9	Proteasome subunit beta. (218 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMB10	Proteasome subunit beta type-10. (273 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	ENSPTRP00000054503	annotation not available (205 aa)
	PSMB6	Proteasome subunit beta. (244 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	ENSPTRP00000090249	annotation not available (96 aa)

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPTRP00000054503	ENSPTRP00000090249	ENSPTRP00000054503	ENSPTRP00000090249	annotation not available	annotation not available	0.990
ENSPTRP00000054503	PSMA1	ENSPTRP00000054503	ENSPTRP00000005906	annotation not available	Proteasome subunit alpha type.	0.997
ENSPTRP00000054503	PSMA2	ENSPTRP00000054503	ENSPTRP00000048032	annotation not available	Proteasome subunit alpha type.	0.993
ENSPTRP00000054503	PSMA3	ENSPTRP00000054503	ENSPTRP00000010840	annotation not available	Proteasome subunit alpha type.	0.996
ENSPTRP00000054503	PSMA4	ENSPTRP00000054503	ENSPTRP00000012552	annotation not available	Proteasome subunit alpha type-4 isoform X2.	0.996
ENSPTRP00000054503	PSMA5	ENSPTRP00000054503	ENSPTRP00000079886	annotation not available	Proteasome subunit alpha type.	0.996
ENSPTRP00000054503	PSMA6	ENSPTRP00000054503	ENSPTRP00000010633	annotation not available	Proteasome subunit alpha type.	0.995
ENSPTRP00000054503	PSMA7	ENSPTRP00000054503	ENSPTRP00000023571	annotation not available	Proteasome subunit alpha type.	0.994
ENSPTRP00000054503	PSMA8	ENSPTRP00000054503	ENSPTRP00000016894	annotation not available	Proteasome subunit alpha type.	0.985
ENSPTRP00000054503	PSMB1	ENSPTRP00000054503	ENSPTRP00000032145	annotation not available	Proteasome subunit beta.	0.996
ENSPTRP00000054503	PSMB10	ENSPTRP00000054503	ENSPTRP00000045585	annotation not available	Proteasome subunit beta type-10.	0.989
ENSPTRP00000054503	PSMB2	ENSPTRP00000054503	ENSPTRP00000000924	annotation not available	Proteasome subunit beta.	0.997
ENSPTRP00000054503	PSMB3	ENSPTRP00000054503	ENSPTRP00000069562	annotation not available	Proteasome subunit beta.	0.544
ENSPTRP00000054503	PSMB4	ENSPTRP00000054503	ENSPTRP00000002194	annotation not available	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.997
ENSPTRP00000054503	PSMB5	ENSPTRP00000054503	ENSPTRP00000088911	annotation not available	Proteasome subunit beta.	0.989
ENSPTRP00000054503	PSMB6	ENSPTRP00000054503	ENSPTRP00000068412	annotation not available	Proteasome subunit beta.	0.993
ENSPTRP00000054503	PSMB7	ENSPTRP00000054503	ENSPTRP00000036490	annotation not available	Proteasome subunit beta.	0.991
ENSPTRP00000054503	PSMB8	ENSPTRP00000054503	ENSPTRP00000030774	annotation not available	Proteasome subunit beta.	0.989
ENSPTRP00000054503	PSMB9	ENSPTRP00000054503	ENSPTRP00000030776	annotation not available	Proteasome subunit beta.	0.991
ENSPTRP00000090249	ENSPTRP00000054503	ENSPTRP00000090249	ENSPTRP00000054503	annotation not available	annotation not available	0.990