Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATOH1 | SOX2 | ENSPTRP00000053413 | ENSPTRP00000046752 | Protein atonal homolog 1; Transcriptional regulator. Activates E box-dependent transcription in collaboration with TCF3/E47, but the activity is completely antagonized by the negative regulator of neurogenesis HES1. Plays a role in the differentiation of subsets of neural cells by activating E box-dependent transcription (By similarity). | SRY-box transcription factor 2. | 0.500 |
| AUTS2 | GPC4 | ENSPTRP00000085153 | ENSPTRP00000038388 | Activator of transcription and developmental regulator AUTS2. | GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.444 |
| AUTS2 | HARS1 | ENSPTRP00000085153 | ENSPTRP00000029618 | Activator of transcription and developmental regulator AUTS2. | HARS isoform 1. | 0.593 |
| AUTS2 | NPAS3 | ENSPTRP00000085153 | ENSPTRP00000075056 | Activator of transcription and developmental regulator AUTS2. | NPAS3 isoform 1. | 0.594 |
| CK820_G0018745 | HARS1 | ENSPTRP00000040179 | ENSPTRP00000029618 | FZD8 isoform 1; Belongs to the G-protein coupled receptor Fz/Smo family. | HARS isoform 1. | 0.436 |
| CK820_G0018745 | NPAS3 | ENSPTRP00000040179 | ENSPTRP00000075056 | FZD8 isoform 1; Belongs to the G-protein coupled receptor Fz/Smo family. | NPAS3 isoform 1. | 0.509 |
| CTCF | HARS1 | ENSPTRP00000014062 | ENSPTRP00000029618 | CCCTC-binding factor (Zinc finger protein). | HARS isoform 1. | 0.527 |
| CTCF | SOX2 | ENSPTRP00000014062 | ENSPTRP00000046752 | CCCTC-binding factor (Zinc finger protein). | SRY-box transcription factor 2. | 0.655 |
| CUX1 | GPC4 | ENSPTRP00000090655 | ENSPTRP00000038388 | Homeobox protein cut-like. | GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.448 |
| CUX1 | HARS1 | ENSPTRP00000090655 | ENSPTRP00000029618 | Homeobox protein cut-like. | HARS isoform 1. | 0.455 |
| CUX1 | NPAS3 | ENSPTRP00000090655 | ENSPTRP00000075056 | Homeobox protein cut-like. | NPAS3 isoform 1. | 0.419 |
| CUX1 | PAX6 | ENSPTRP00000090655 | ENSPTRP00000065705 | Homeobox protein cut-like. | PAX6 isoform 13. | 0.540 |
| CUX1 | PTBP2 | ENSPTRP00000090655 | ENSPTRP00000087365 | Homeobox protein cut-like. | Polypyrimidine tract binding protein 2. | 0.515 |
| CUX1 | SOX2 | ENSPTRP00000090655 | ENSPTRP00000046752 | Homeobox protein cut-like. | SRY-box transcription factor 2. | 0.664 |
| CUX1 | TBR1 | ENSPTRP00000090655 | ENSPTRP00000046292 | Homeobox protein cut-like. | T-box brain transcription factor 1. | 0.706 |
| EN1 | PAX6 | ENSPTRP00000049224 | ENSPTRP00000065705 | Homeobox protein engrailed-like. | PAX6 isoform 13. | 0.542 |
| GLI2 | GLI3 | ENSPTRP00000040313 | ENSPTRP00000032656 | GLI family zinc finger 2. | Transcriptional repressor GLI3R; Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in re [...] | 0.987 |
| GLI2 | SOX2 | ENSPTRP00000040313 | ENSPTRP00000046752 | GLI family zinc finger 2. | SRY-box transcription factor 2. | 0.448 |
| GLI3 | GLI2 | ENSPTRP00000032656 | ENSPTRP00000040313 | Transcriptional repressor GLI3R; Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in re [...] | GLI family zinc finger 2. | 0.987 |
| GLI3 | PAX6 | ENSPTRP00000032656 | ENSPTRP00000065705 | Transcriptional repressor GLI3R; Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in re [...] | PAX6 isoform 13. | 0.481 |
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