STRINGSTRING
TARDBP TARDBP SRRM1 SRRM1 EIF3I EIF3I MAGOH MAGOH DDX20 DDX20 RBM8A RBM8A NUP133 NUP133 UPF2 UPF2 RPP38 RPP38 EIF4EBP2 EIF4EBP2 EIF3F EIF3F EIF4G2 EIF4G2 NXF1 NXF1 AAAS AAAS NUP107 NUP107 NUP37 NUP37 EIF2B1 EIF2B1 SAP18 SAP18 ACIN1 ACIN1 GEMIN2 GEMIN2 PNN PNN EIF2S1 EIF2S1 EIF2B2 EIF2B2 EIF5 EIF5 CYFIP1 CYFIP1 RPP25 RPP25 SNUPN SNUPN UBE2I UBE2I EIF3C EIF3C GEMIN4 GEMIN4 NUP88 NUP88 EIF4A1 EIF4A1 FXR2 FXR2 EIF1 EIF1 KPNB1 KPNB1 THOC1 THOC1 SEH1L SEH1L ELAC1 ELAC1 EIF3G EIF3G POP4 POP4 EIF2B4 EIF2B4 GEMIN6 GEMIN6 RANBP2-2 RANBP2-2 NUP35 NUP35 NXT1 NXT1 EIF2S2 EIF2S2 PABPC1L PABPC1L EEF1A2 EEF1A2 EIF3D EIF3D TRNT1 TRNT1 NUP210 NUP210 EIF1B EIF1B THOC7 THOC7 FXR1 FXR1 EIF2B5 EIF2B5 EIF4G1 EIF4G1 SENP2 SENP2 EIF4A2 EIF4A2 TACC3 TACC3 PHAX PHAX GEMIN5 GEMIN5 POM121L2 POM121L2 XPO5 XPO5 POM121C POM121C POP7 POP7 TGS1 TGS1 POP1 POP1 RPP25L RPP25L UPF3B UPF3B FMR1 FMR1 EIF1AY EIF1AY PABPC4 PABPC4 THOC5 THOC5 XPO1 XPO1 PABPC3 PABPC3 GLE1 GLE1 EEF1A1 EEF1A1 THOC3 THOC3 EIF4E1B EIF4E1B NUP160 NUP160 PAIP1 PAIP1 XPOT XPOT TPR TPR EIF5B EIF5B RAE1 RAE1 FUS FUS DDX39B DDX39B EIF2S3B EIF2S3B PABPC5 PABPC5 NXF5 NXF5 PABPC1L2A PABPC1L2A SUMO2 SUMO2 NCBP1 NCBP1 GEMIN7 GEMIN7 PRMT5 PRMT5 EIF3B EIF3B CYFIP2 CYFIP2 EIF2B3 EIF2B3 NUP42 NUP42 NUP93 NUP93 RPP30 RPP30 RNPS1 RNPS1 NDC1 NDC1 NUP153 NUP153 PABPC4L PABPC4L LOC455519 LOC455519 UPF1 UPF1 UPF3A UPF3A EIF4E EIF4E PABPC1 PABPC1 EIF3H EIF3H LOC736868 LOC736868 SEC13 SEC13 NUP43 NUP43 ENSPTRP00000072120 ENSPTRP00000072120 NUP188-2 NUP188-2 CK820_G0055937 CK820_G0055937 STRAP STRAP GEMIN8 GEMIN8 POM121 POM121 EIF3J EIF3J NUP155 NUP155 EIF3E EIF3E NMD3 NMD3 NUP214 NUP214 NUP58 NUP58 ELAC2 ELAC2 RAN RAN NXT2 NXT2 EIF4G3 EIF4G3 SUMO3-2 SUMO3-2 NUP205 NUP205 NUP98 NUP98 RPP40 RPP40 CLNS1A CLNS1A DDX19B DDX19B NUP50 NUP50 PYM1 PYM1 RPP14 RPP14 ALYREF ALYREF EIF4B EIF4B EIF4E2 EIF4E2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TARDBPTAR DNA binding protein. (414 aa)
SRRM1SRRM1 isoform 3. (918 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (325 aa)
MAGOHMago-nashi homolog, proliferation-associated. (146 aa)
DDX20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20. (861 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
NUP133NUP133 isoform 1. (1156 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1272 aa)
RPP38Ribonuclease P/MRP 38kDa subunit. (311 aa)
EIF4EBP2Eukaryotic translation initiation factor 4E binding protein 2. (120 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (361 aa)
EIF4G2Eukaryotic translation initiation factor 4 gamma 2. (920 aa)
NXF1Nuclear RNA export factor 1. (619 aa)
AAASAchalasia, adrenocortical insufficiency, alacrimia. (546 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (925 aa)
NUP37Nucleoporin 37kDa. (326 aa)
EIF2B1Eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa; Belongs to the eIF-2B alpha/beta/delta subunits family. (306 aa)
SAP18Sin3A associated protein 18. (172 aa)
ACIN1ACIN1 isoform 7. (1342 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (280 aa)
PNNPinin, desmosome associated protein. (719 aa)
EIF2S1Eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa. (315 aa)
EIF2B2Eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa; Belongs to the eIF-2B alpha/beta/delta subunits family. (351 aa)
EIF5Eukaryotic translation initiation factor 5. (431 aa)
CYFIP1Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1253 aa)
RPP25Ribonuclease P and MRP subunit p25. (199 aa)
SNUPNSnurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family. (360 aa)
UBE2IUbiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. (198 aa)
EIF3CEukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (311 aa)
GEMIN4Gem (Nuclear organelle) associated protein 4. (1058 aa)
NUP88NUP88 isoform 1. (741 aa)
EIF4A1Eukaryotic initiation factor 4A-I; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity). (406 aa)
FXR2Fragile X mental retardation, autosomal homolog 2. (673 aa)
EIF1Eukaryotic translation initiation factor 1. (113 aa)
KPNB1Karyopherin (Importin) beta 1. (876 aa)
THOC1THOC1 isoform 2. (664 aa)
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (360 aa)
ELAC1ElaC ribonuclease Z 1. (363 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (320 aa)
POP4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (220 aa)
EIF2B4Eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa; Belongs to the eIF-2B alpha/beta/delta subunits family. (523 aa)
GEMIN6Gem (Nuclear organelle) associated protein 6. (167 aa)
RANBP2-2E3 SUMO-protein ligase RanBP2; E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I. Involved in transport factor (Ran-GTP, karyopherin)-mediated protein import via the F-G repeat-containing domain which acts as a docking site for substrates. Component of the nuclear export pathway. Specific docking site for the nuclear export factor exportin-1. Sumoylates PML at 'Lys-490' which is essential for the proper assembly of PML-NB. Recruits BICD2 to the nuclear envelope and cytoplasmic stacks of nuclear pore complex known as annulate lamellae during G2 phase of cell [...] (439 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (326 aa)
NXT1Nuclear transport factor 2 like export factor 1. (140 aa)
EIF2S2Eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa. (333 aa)
PABPC1LPoly(A) binding protein cytoplasmic 1 like. (330 aa)
EEF1A2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl- tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required [...] (548 aa)
TRNT1tRNA nucleotidyl transferase, CCA-adding, 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (434 aa)
NUP210NUP210 isoform 1. (1887 aa)
EIF1BEukaryotic translation initiation factor 1B. (113 aa)
THOC7THO complex 7 homolog. (204 aa)
FXR1Fragile X mental retardation, autosomal homolog 1. (782 aa)
EIF2B5Eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa. (721 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1559 aa)
SENP2SUMO1/sentrin/SMT3 specific peptidase 2. (589 aa)
EIF4A2Eukaryotic translation initiation factor 4A2; Belongs to the DEAD box helicase family. (408 aa)
TACC3Transforming acidic coiled-coil containing protein 3. (838 aa)
PHAXPhosphorylated adaptor for RNA export. (394 aa)
GEMIN5Gem nuclear organelle associated protein 5. (1508 aa)
POM121L2POM121L2 isoform 2. (1035 aa)
XPO5XPO5 isoform 1. (1204 aa)
POM121CPOM121C isoform 4. (1229 aa)
POP7Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences; Belongs to the histone-like Alba family. (140 aa)
TGS1Trimethylguanosine synthase 1. (855 aa)
POP1Processing of 1, ribonuclease P/MRP subunit. (1024 aa)
RPP25LRibonuclease P/MRP subunit p25 like. (163 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
FMR1Fragile X mental retardation 1. (632 aa)
EIF1AYEukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (By similarity); Belongs to the eIF-1A family. (144 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
THOC5THOC5 isoform 1. (683 aa)
XPO1XPO1 isoform 1. (1071 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (633 aa)
GLE1GLE1 RNA export mediator homolog. (690 aa)
EEF1A1Elongation factor 1-alpha 1; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. With PARP1 and TXK, forms a complex that acts as a T helper 1 (Th1) cell-specific transcription factor and binds the promoter of IFN-gamma to directly regulate its transcription, and is thus involved importantly in Th1 cytokine production; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (462 aa)
THOC3THOC3 isoform 4. (351 aa)
EIF4E1BEukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family. (242 aa)
NUP160NUP160 isoform 2. (1436 aa)
PAIP1Poly(A) binding protein interacting protein 1. (479 aa)
XPOTExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (962 aa)
TPRTranslocated promoter region (To activated MET oncogene). (2363 aa)
EIF5BEukaryotic translation initiation factor 5B. (1220 aa)
RAE1RAE1 RNA export 1 homolog. (368 aa)
FUSFUS isoform 7. (526 aa)
DDX39BSpliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...] (428 aa)
EIF2S3BEukaryotic translation initiation factor 2 subunit gamma B. (466 aa)
PABPC5Polyadenylate-binding protein 5; Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo (By similarity). (382 aa)
NXF5NXF5 isoform 2. (397 aa)
PABPC1L2APABPC1L2A isoform 1. (200 aa)
SUMO2Small ubiquitin-related modifier. (145 aa)
NCBP1Nuclear cap binding protein subunit 1, 80kDa. (790 aa)
GEMIN7GEMIN7 isoform 6. (131 aa)
PRMT5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (620 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (819 aa)
CYFIP2Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1278 aa)
EIF2B3Eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa. (452 aa)
NUP42NUPL2 isoform 7. (448 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (880 aa)
RPP30Ribonuclease P/MRP subunit p30. (322 aa)
RNPS1RNA binding protein with serine rich domain 1. (305 aa)
NDC1Transmembrane protein 48. (776 aa)
NUP153NUP153 isoform 1. (1506 aa)
PABPC4LPABPC4L isoform 1. (430 aa)
LOC455519EIF2S3 isoform 1. (454 aa)
UPF1UPF1 RNA helicase and ATPase. (1129 aa)
UPF3AUPF3A isoform 1. (476 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (247 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (366 aa)
LOC736868Protein mago nashi homolog. (148 aa)
SEC13SEC13 isoform 7; Belongs to the WD repeat SEC13 family. (368 aa)
NUP43Nucleoporin 43kDa. (380 aa)
ENSPTRP00000072120Eukaryotic translation initiation factor 3 subunit C. (66 aa)
NUP188-2Nucleoporin 188kDa. (1763 aa)
CK820_G0055937NXF2B isoform 3. (624 aa)
STRAPSerine/threonine kinase receptor associated protein. (363 aa)
GEMIN8Gem (Nuclear organelle) associated protein 8. (243 aa)
POM121POM121 isoform 5. (1219 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (259 aa)
NUP155Nucleoporin 155kDa. (1391 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (496 aa)
NMD360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (529 aa)
NUP214NUP214 isoform 1. (2090 aa)
NUP58Nucleoporin like 1. (603 aa)
ELAC2Zinc phosphodiesterase ELAC protein 2; Zinc phosphodiesterase, which displays mitochondrial tRNA 3'- processing endonuclease activity. Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (By similarity). (826 aa)
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (234 aa)
NXT2Nuclear transport factor 2 like export factor 2. (197 aa)
EIF4G3EIF4G3 isoform 5. (1776 aa)
SUMO3-2Small ubiquitin-related modifier. (103 aa)
NUP205Nucleoporin 205kDa. (2017 aa)
NUP98Nucleoporin 98kDa. (1800 aa)
RPP40Ribonuclease P/MRP 40kDa subunit. (363 aa)
CLNS1AChloride channel, nucleotide-sensitive, 1A. (237 aa)
DDX19BDEAD (Asp-Glu-Ala-As) box polypeptide 19A. (446 aa)
NUP50Nucleoporin 50kDa. (468 aa)
PYM1PYM homolog 1, exon junction complex associated factor. (204 aa)
RPP14Ribonuclease P/MRP subunit p14. (124 aa)
ALYREFAly/REF export factor. (285 aa)
EIF4BEukaryotic translation initiation factor 4B. (615 aa)
EIF4E2Eukaryotic translation initiation factor 4E family member 2; Belongs to the eukaryotic initiation factor 4E family. (249 aa)
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
Server load: low (12%) [HD]