STRINGSTRING
SMARCE1 SMARCE1 MED24 MED24 MED1 MED1 DDX5 DDX5 CR201_G0024013 CR201_G0024013 WBP2 WBP2 BCAS3 BCAS3 MED13 MED13 ENSPPYP00000010327 ENSPPYP00000010327 MED16 MED16 SMARCA4 SMARCA4 STRN STRN CTNNB1 CTNNB1 FOXL2 FOXL2 PPARGC1A PPARGC1A PRKCB PRKCB SMAD3 SMAD3 TRIP4 TRIP4 SNW1 SNW1 SLIRP SLIRP CR201_G0009767 CR201_G0009767 MED4 MED4 FLT3 FLT3 RNF6 RNF6 NCOR2 NCOR2 CCDC62 CCDC62 OASL OASL DDX54 DDX54 CRY1 CRY1 NR1H4 NR1H4 GRIP1 GRIP1 BAZ2A BAZ2A RARG RARG VDR VDR RERG RERG FKBP4 FKBP4 TRIM68 TRIM68 TAF10 TAF10 MYOD1 MYOD1 GTF2H1 GTF2H1 CRY2 CRY2 CR201_G0012702-2 CR201_G0012702-2 CTBP2 CTBP2 CR201_G0012702 CR201_G0012702 CR201_G0012836 CR201_G0012836 MMS19 MMS19 LCOR LCOR NRBF2 NRBF2 JMJD1C JMJD1C SIRT1 SIRT1 LOC100435863 LOC100435863 PARK7 PARK7 SRARP SRARP PADI2 PADI2 KDM1A KDM1A ARID1A ARID1A NR0B2 NR0B2 CR201_G0015676 CR201_G0015676 GTF2B GTF2B LRIF1 LRIF1 PROX1 PROX1 PARP1 PARP1 LEF1 LEF1 PPID PPID ISL1 ISL1 ZNF366 ZNF366 CR201_G0017535 CR201_G0017535 TAF7 TAF7 RNF14 RNF14 PPARGC1B PPARGC1B NSD1 NSD1 TRERF1 TRERF1 NCOA7 NCOA7 TCF21 TCF21 LATS1 LATS1 ESR1 ESR1 DAXX DAXX BUD31 BUD31 TRIP6 TRIP6 TRIM24 TRIM24 SMARCD3 SMARCD3 NKX3-1 NKX3-1 TACC1 TACC1 DCAF13 DCAF13 MED30 MED30 KDM4C KDM4C NR4A3 NR4A3 RXRA RXRA ENSPPYP00000022364 ENSPPYP00000022364 NR0B1 NR0B1 MED14 MED14 MED12 MED12 TAF1 TAF1 TAF7L TAF7L HMGA1 HMGA1 NCOA2 NCOA2 ENSPPYP00000024141 ENSPPYP00000024141 FOXH1 FOXH1 ENSPPYP00000024510 ENSPPYP00000024510 NR4A1 NR4A1 ENSPPYP00000014053 ENSPPYP00000014053 NCOA1 NCOA1 NR4A2 NR4A2 STAT1 STAT1 TRIP12 TRIP12 NR1I2 NR1I2 PPARG PPARG CALR CALR PKN1 PKN1 MED25 MED25 NR1H2 NR1H2 ZBTB7A ZBTB7A ENSPPYP00000011868 ENSPPYP00000011868 PCNA PCNA ASXL1 ASXL1 NCOA6 NCOA6 SRC SRC NCOA3 NCOA3 CEBPB CEBPB PRPF6 PRPF6 ENSPPYP00000012589 ENSPPYP00000012589 NRIP1 NRIP1 PRMT2 PRMT2 CR201_G0047492 CR201_G0047492 XBP1 XBP1 GAS2L1 GAS2L1 YWHAH YWHAH EP300 EP300 ARID5A ARID5A KDM3A KDM3A TADA3 TADA3 FOXP1 FOXP1 TMF1 TMF1 DCAF1 DCAF1 CNOT1 CNOT1 TGFB1I1 TGFB1I1 NCOR1 NCOR1 STAT5B STAT5B
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (411 aa)
MED24MED24 isoform 12. (1054 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Acts as a coactivator for [...] (1586 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Involved in the alternative regulation of pre-mRNA splicing; its RNA helicase activity is necessary for increasing tau exon 10 inclusion and occurs in a RBM4-dependent manner. Binds to the tau pre- mRNA in the stem-loop region downstream of exon 10. The rate of ATP hydrolysis is highly stimulated by single-stranded RNA. Involved in transcriptional regulation; the function is independent of the RNA helicase activity. Transcriptional coactivator for androgen receptor AR but probably not ESR1. Synergizes with DDX17 and SRA1 RNA to activate MYOD1 t [...] (614 aa)
CR201_G0024013WIPI1 isoform 2. (251 aa)
WBP2WW domain binding protein 2. (261 aa)
BCAS3BCAS3 isoform 8. (841 aa)
MED13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2100 aa)
ENSPPYP00000010327annotation not available (526 aa)
MED16Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (725 aa)
SMARCA4SMARCA4 isoform 2. (1647 aa)
STRNSTRN isoform 1. (780 aa)
CTNNB1CTNNB1 isoform 2. (781 aa)
FOXL2FOXL2 isoform 1. (376 aa)
PPARGC1APPARG coactivator 1 alpha. (798 aa)
PRKCBProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (673 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
TRIP4TRIP4 isoform 2. (581 aa)
SNW1SNW domain-containing protein 1; Involved in pre-mRNA splicing as component of the spliceosome. Is required in the specific splicing of CDKN1A pre-mRNA; the function probably involves the recruitment of U2AF2 to the mRNA. Is proposed to recruit PPIL1 to the spliceosome. May be involved in cyclin-D1/CCND1 mRNA stability through the SNARP complex which associates with both the 3'end of the CCND1 gene and its mRNA. Involved in transcriptional regulation. Modulates TGF-beta-mediated transcription via association with SMAD proteins, MYOD1-mediated transcription via association with PABPN1, [...] (538 aa)
SLIRPSRA stem-loop-interacting RNA-binding protein, mitochondrial; RNA-binding protein that acts as a nuclear receptor corepressor. Probably acts by binding the SRA RNA, and repressing the SRA-mediated nuclear receptor coactivation. Binds the STR7 loop of SRA RNA. Also able to repress glucocorticoid (GR), androgen (AR), thyroid (TR) and VDR-mediated transactivation (By similarity). (109 aa)
CR201_G0009767HIF1A isoform 5. (735 aa)
MED4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
FLT3FLT3 isoform 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (993 aa)
RNF6RNF6 isoform 2. (685 aa)
NCOR2NCOR2 isoform 6. (2461 aa)
CCDC62CCDC62 isoform 1. (614 aa)
OASL2'-5'-oligoadenylate synthetase like. (514 aa)
DDX54ATP-dependent RNA helicase DDX54; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (883 aa)
CRY1Cryptochrome circadian regulator 1. (586 aa)
NR1H4NR1H4 isoform 5. (475 aa)
GRIP1GRIP1 isoform 2. (1016 aa)
BAZ2ABAZ2A isoform 2. (1912 aa)
RARGRARG isoform 5. (469 aa)
VDRVDR isoform 4. (486 aa)
RERGRAS like estrogen regulated growth inhibitor. (199 aa)
FKBP4Peptidylprolyl isomerase. (459 aa)
TRIM68TRIM68 isoform 1. (344 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
CRY2Cryptochrome circadian regulator 2. (593 aa)
CR201_G0012702-2TACC2 isoform 5. (1307 aa)
CTBP2CTBP2 isoform 10. (985 aa)
CR201_G0012702TACC2 isoform 1. (1094 aa)
CR201_G0012836TCF7L2 isoform 2. (430 aa)
MMS19MMS19 isoform 3. (1030 aa)
LCORLCOR isoform 2. (1557 aa)
NRBF2Nuclear receptor-binding factor 2; May modulate transcriptional activation by target nuclear receptors. Can act as transcriptional activator (in vitro) (By similarity); Belongs to the NRBF family. (287 aa)
JMJD1CJumonji domain containing 1C. (2540 aa)
SIRT1SIRT1 isoform 1. (746 aa)
LOC100435863HMGA1 isoform 3. (95 aa)
PARK7PARK7 isoform 1. (189 aa)
SRARPSteroid receptor associated and regulated protein. (169 aa)
PADI2Peptidyl arginine deiminase 2. (665 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (876 aa)
ARID1AARID1A isoform 1. (2006 aa)
NR0B2Nuclear receptor subfamily 0 group B member 2. (257 aa)
CR201_G0015676THRAP3 isoform 1. (560 aa)
GTF2BTranscription initiation factor IIB; General transcription factor that plays a role in transcription initiation by RNA polymerase II (Pol II). Involved in the pre-initiation complex (PIC) formation and Pol II recruitment at promoter DNA. Together with the TATA box-bound TBP forms the core initiation complex and provides a bridge between TBP and the Pol II- TFIIF complex. Released from the PIC early following the onset of transcription during the initiation and elongation transition and reassociates with TBP during the next transcription cycle. Associates with chromatin to core promoter [...] (373 aa)
LRIF1LRIF1 isoform 1. (742 aa)
PROX1Prospero homeobox 1. (737 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (972 aa)
LEF1Lymphoid enhancer binding factor 1. (399 aa)
PPIDPeptidylprolyl isomerase D. (370 aa)
ISL1ISL1 isoform 1. (349 aa)
ZNF366ZNF366 isoform 1. (744 aa)
CR201_G0017535BRD8 isoform 7. (969 aa)
TAF7Transcription initiation factor TFIID subunit 7; Functions as a component of the DNA-binding general transcription factor complex TFIID, a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. Present in both of the previously described TFIID species which either lack or contain TAFII30 (TFIID alpha and TFIID beta respectively); Belongs to the TAF7 family. (349 aa)
RNF14RBR-type E3 ubiquitin transferase. (474 aa)
PPARGC1BPPARGC1B isoform 1. (1022 aa)
NSD1NSD1 isoform 2. (2427 aa)
TRERF1TRERF1 isoform 4. (1115 aa)
NCOA7NCOA7 isoform 1. (900 aa)
TCF21Transcription factor 21. (179 aa)
LATS1Large tumor suppressor kinase 1. (1130 aa)
ESR1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (595 aa)
DAXXDeath domain associated protein. (743 aa)
BUD31BUD31 isoform 1. (144 aa)
TRIP6Thyroid hormone receptor interactor 6. (476 aa)
TRIM24TRIM24 isoform 1. (1050 aa)
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3. (483 aa)
NKX3-1NKX3-1 isoform 1. (236 aa)
TACC1TACC1 isoform 1. (789 aa)
DCAF13DDB1- and CUL4-associated factor 13; Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex (By similarity); Belongs to the WD repeat DCAF13/WDSOF1 family. (445 aa)
MED30Mediator complex subunit 30. (178 aa)
KDM4CLysine demethylase 4C. (1056 aa)
NR4A3NR4A3 isoform 1. (626 aa)
RXRARXRA isoform 2. (456 aa)
ENSPPYP00000022364annotation not available (138 aa)
NR0B1Nuclear receptor subfamily 0 group B member 1. (470 aa)
MED14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1418 aa)
MED12MED12 isoform 3. (2178 aa)
TAF1Transcription initiation factor TFIID subunit. (1755 aa)
TAF7LTAF7L isoform 2. (376 aa)
HMGA1HMGA1 isoform 1. (104 aa)
NCOA2Nuclear receptor coactivator. (1464 aa)
ENSPPYP00000024141annotation not available (55 aa)
FOXH1FOXH1 isoform 1. (366 aa)
ENSPPYP00000024510annotation not available (85 aa)
NR4A1NR4A1 isoform 2. (611 aa)
ENSPPYP00000014053annotation not available (357 aa)
NCOA1Nuclear receptor coactivator. (1293 aa)
NR4A2Nuclear receptor subfamily 4 group A member 2; Transcriptional regulator which is important for the differentiation and maintenance of meso-diencephalic dopaminergic (mdDA) neurons during development. It is crucial for expression of a set of genes such as SLC6A3, SLC18A2, TH and DRD2 which are essential for development of mdDA neurons (By similarity); Belongs to the nuclear hormone receptor family. (598 aa)
STAT1Signal transducer and activator of transcription. (766 aa)
TRIP12TRIP12 isoform 4. (2039 aa)
NR1I2NR1I2 isoform 1. (393 aa)
PPARGPeroxisome proliferator-activated receptor gamma. (477 aa)
CALRCalreticulin. (417 aa)
PKN1PKN1 isoform 3. (943 aa)
MED25MED25 isoform 7. (834 aa)
NR1H2NR1H2 isoform 11. (413 aa)
ZBTB7AZBTB7A isoform 1. (421 aa)
ENSPPYP00000011868annotation not available (149 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
ASXL1ASXL transcriptional regulator 1. (1476 aa)
NCOA6NCOA6 isoform 5. (2070 aa)
SRCTyrosine-protein kinase. (553 aa)
NCOA3Nuclear receptor coactivator. (1420 aa)
CEBPBCCAAT/enhancer-binding protein. (345 aa)
PRPF6Pre-mRNA-processing factor 6; Involved in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex, one of the building blocks of the spliceosome. Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but does not affect estrogen-induced transactivation. (941 aa)
ENSPPYP00000012589Putative nuclear receptor corepressor 1-like protein NCOR1P1. (101 aa)
NRIP1NRIP1 isoform 1. (1141 aa)
PRMT2PRMT2 isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (433 aa)
CR201_G0047492PRAME isoform 2. (377 aa)
XBP1X-box binding protein 1. (262 aa)
GAS2L1GAS2L1 isoform 1. (681 aa)
YWHAHTyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta; Belongs to the 14-3-3 family. (246 aa)
EP300EP300 isoform 1. (2380 aa)
ARID5AARID5A isoform 2. (301 aa)
KDM3ALysine demethylase 3A. (1321 aa)
TADA3Transcriptional adapter 3; Functions as a component of the PCAF complex. The PCAF complex is capable of efficiently acetylating histones in a nucleosomal context. The PCAF complex could be considered as the human version of the yeast SAGA complex. Also known as a coactivator for p53/TP53- dependent transcriptional activation (By similarity). Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4 (By similarity). (432 aa)
FOXP1FOXP1 isoform 1. (677 aa)
TMF1TMF1 isoform 1. (992 aa)
DCAF1DCAF1 isoform 2. (1483 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2376 aa)
TGFB1I1Transforming growth factor beta-1-induced transcript 1 protein; Functions as a molecular adapter coordinating multiple protein-protein interactions at the focal adhesion complex and in the nucleus. Links various intracellular signaling modules to plasma membrane receptors and regulates the Wnt and TGFB signaling pathways. (461 aa)
NCOR1NCOR1 isoform 1. (2467 aa)
STAT5BSignal transducer and activator of transcription. (788 aa)
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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