STRINGSTRING
POLI POLI POLH POLH POLD2 POLD2 POLD1 POLD1 PCNA PCNA RFC3 RFC3 POLK POLK RFC5 RFC5 UBA7 UBA7 CLCF1 CLCF1 RFC4 RFC4 UBA52 UBA52 TRIM25 TRIM25 RPA1 RPA1 ISG15 ISG15 USP10 USP10 RPS27A RPS27A USP43 USP43 PCLAF PCLAF POLE4 POLE4 UBE2L6 UBE2L6 ENSCAFP00000050780 ENSCAFP00000050780 RFC2 RFC2 POLE2 POLE2 AFF3 AFF3 POLE POLE RPA3 RPA3 POLE3 POLE3 POLD3 POLD3 RPA2 RPA2 RFC1 RFC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLIDNA polymerase iota. (702 aa)
POLHDNA polymerase eta. (712 aa)
POLD2DNA polymerase delta 2, accessory subunit. (519 aa)
POLD1DNA polymerase. (1107 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
RFC3Replication factor C subunit 3. (356 aa)
POLKDNA polymerase kappa. (861 aa)
RFC5Replication factor C subunit 5. (339 aa)
UBA7Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. (1008 aa)
CLCF1Cardiotrophin like cytokine factor 1. (261 aa)
RFC4Replication factor C subunit 4. (363 aa)
UBA52Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] (128 aa)
TRIM25Tripartite motif containing 25. (631 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
ISG15ISG15 ubiquitin like modifier. (168 aa)
USP10Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (850 aa)
RPS27AUbiquitin-like domain-containing protein. (156 aa)
USP43Ubiquitin specific peptidase 43; Belongs to the peptidase C19 family. (1121 aa)
PCLAFPAF domain-containing protein. (160 aa)
POLE4CBFD_NFYB_HMF domain-containing protein. (275 aa)
UBE2L6Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. (190 aa)
ENSCAFP00000050780Ubiquitin-like domain-containing protein. (151 aa)
RFC2Replication factor C subunit 2. (367 aa)
POLE2DNA polymerase epsilon 2, accessory subunit. (640 aa)
AFF3DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1346 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2335 aa)
RPA3Uncharacterized protein. (351 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (187 aa)
POLD3DNA polymerase delta 3, accessory subunit. (541 aa)
RPA2Replication protein A2. (390 aa)
RFC1Replication factor C subunit 1. (1198 aa)
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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