STRINGSTRING
TNF TNF AHCYL2 AHCYL2 SPTBN1 SPTBN1 NPY NPY DNMT3A DNMT3A BIN1 BIN1 PPARG PPARG LOC106560171 LOC106560171 SIRT3 SIRT3 AHCY AHCY CYP2C18 CYP2C18 APP APP TET3 TET3 SORBS3 SORBS3 BDNF BDNF PRL PRL TET2 TET2 SORL1 SORL1 LOC486670 LOC486670 BACE1 BACE1 SIRT1 SIRT1 RELA RELA COMT COMT CYP3A4 CYP3A4 SPTB SPTB PSEN1 PSEN1 TBXA2R TBXA2R G6PD G6PD AHCYL1 AHCYL1 H4C7 H4C7 LOC483167 LOC483167 LOC488277 LOC488277 GSK3B GSK3B RPSA RPSA LOC488277-2 LOC488277-2 HDAC1 HDAC1 LOC480110 LOC480110 LOC488277-3 LOC488277-3 LOC488277-4 LOC488277-4 LOC488277-5 LOC488277-5 TET1 TET1 LOC612779 LOC612779 LOC488277-6 LOC488277-6 LOC111090006 LOC111090006 LOC488277-7 LOC488277-7 NAMPT NAMPT TP53 TP53 MME MME SPTBN4-2 SPTBN4-2 RPSA-4 RPSA-4 SNCA SNCA SIRT2 SIRT2 H3C13 H3C13 RPSA-3 RPSA-3 ROCK1 ROCK1 RPSA-2 RPSA-2 LOC488263 LOC488263 LOC488277-8 LOC488277-8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TNFTumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...] (233 aa)
AHCYL2Adenosylhomocysteinase like 2; Belongs to the adenosylhomocysteinase family. (648 aa)
SPTBN1Spectrin beta chain; Belongs to the spectrin family. (2351 aa)
NPYNeuropeptide Y. (248 aa)
DNMT3ADNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (897 aa)
BIN1Bridging integrator 1. (788 aa)
PPARGPeroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (529 aa)
LOC106560171Uncharacterized protein. (276 aa)
SIRT3NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (372 aa)
AHCYAdenosylhomocysteinase; Belongs to the adenosylhomocysteinase family. (425 aa)
CYP2C18Cytochrome P450 2C21; Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. Showed testosterone hydrolase activity. (547 aa)
APPGamma-secretase C-terminal fragment 57; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those medi [...] (770 aa)
TET3Tet methylcytosine dioxygenase 3. (1795 aa)
SORBS3Sorbin and SH3 domain containing 3. (306 aa)
BDNFBrain-derived neurotrophic factor; Important signaling molecule that activates signaling cascades downstream of NTRK2 (By similarity). During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including lo [...] (323 aa)
PRLProlactin. (229 aa)
TET2Tet methylcytosine dioxygenase 2. (2018 aa)
SORL1Sortilin related receptor 1. (2204 aa)
LOC486670Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
BACE1Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (414 aa)
SIRT1Sirtuin 1. (745 aa)
RELARELA proto-oncogene, NF-kB subunit. (542 aa)
COMTCatechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones. (269 aa)
CYP3A4Cytochrome P450 3A12; Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. (504 aa)
SPTBSpectrin beta chain; Belongs to the spectrin family. (2326 aa)
PSEN1Presenilin-1 CTF subunit; Catalytic subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors and APP (amyloid- beta precursor protein). Requires the presence of the other members of the gamma-secretase complex for protease activity. Plays a role in Notch and Wnt signaling cascades and regulation of downstream processes via its role in processing key regulatory proteins, and by regulating cytosolic CTNNB1 levels. Stimulates cell-cell adhesion via its interaction with CDH1; this stabili [...] (466 aa)
TBXA2RThromboxane A2 receptor. (343 aa)
G6PDGlucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (624 aa)
AHCYL1Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family. (547 aa)
H4C7Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
LOC483167Histone H4. (103 aa)
LOC488277Histone H4. (103 aa)
GSK3BGlycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. (433 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
LOC488277-2Histone H4. (103 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (508 aa)
LOC480110Histone H3; Belongs to the histone H3 family. (136 aa)
LOC488277-3Histone H4. (103 aa)
LOC488277-4Histone H4. (103 aa)
LOC488277-5Histone H4. (103 aa)
TET1Tet methylcytosine dioxygenase 1. (2137 aa)
LOC612779Histone H3; Belongs to the histone H3 family. (136 aa)
LOC488277-6Histone H4. (103 aa)
LOC111090006Histone H3; Belongs to the histone H3 family. (136 aa)
LOC488277-7Histone H4. (103 aa)
NAMPTNicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family. (534 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] (445 aa)
MMEUncharacterized protein. (770 aa)
SPTBN4-2Uncharacterized protein. (675 aa)
RPSA-440S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (301 aa)
SNCAAlpha-synuclein; Belongs to the synuclein family. (204 aa)
SIRT2NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (334 aa)
H3C13Histone H3. (136 aa)
RPSA-340S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (278 aa)
ROCK1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1381 aa)
RPSA-240S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (358 aa)
LOC488263Histone H3; Belongs to the histone H3 family. (136 aa)
LOC488277-8Histone H4. (103 aa)
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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