STRINGSTRING
PABPC4 PABPC4 PAN3 PAN3 PABPC4L PABPC4L EIF4G1 EIF4G1 PABPC1 PABPC1 EIF4A2 EIF4A2 EIF4E3 EIF4E3 EIF4B EIF4B EIF4A1 EIF4A1 ENSVVUP00000025679 ENSVVUP00000025679 PABPC1L PABPC1L PAN2 PAN2 EIF4E-2 EIF4E-2 EIF4H EIF4H PAIP1 PAIP1 EIF4G2 EIF4G2 ENSVVUP00000039151 ENSVVUP00000039151 ENSVVUP00000039325 ENSVVUP00000039325 EIF4G3 EIF4G3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (955 aa)
PABPC4LLOW QUALITY PROTEIN: polyadenylate-binding protein 4-like. (219 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1 isoform X2. (1610 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (565 aa)
EIF4A2Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (407 aa)
EIF4E3Eukaryotic translation initiation factor 4E type 3 isoform X2; Belongs to the eukaryotic initiation factor 4E family. (142 aa)
EIF4BEukaryotic translation initiation factor 4B isoform X1. (581 aa)
EIF4A1Eukaryotic initiation factor 4A-I isoform X1. (333 aa)
ENSVVUP00000025679annotation not available (88 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (601 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1198 aa)
EIF4E-2Eukaryotic translation initiation factor 4E isoform X1; Belongs to the eukaryotic initiation factor 4E family. (222 aa)
EIF4HEukaryotic translation initiation factor 4H. (312 aa)
PAIP1Polyadenylate-binding protein-interacting protein 1 isoform X1. (400 aa)
EIF4G2Eukaryotic translation initiation factor 4 gamma 2. (907 aa)
ENSVVUP00000039151annotation not available (108 aa)
ENSVVUP00000039325annotation not available (175 aa)
EIF4G3Eukaryotic translation initiation factor 4 gamma 3 isoform X6. (1745 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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