STRINGSTRING
PPIH PPIH LSM7 LSM7 SNRPG SNRPG SNRPD2 SNRPD2 PRPF4 PRPF4 ENSVVUP00000004662 ENSVVUP00000004662 SNRPD1 SNRPD1 SNRPE-2 SNRPE-2 ENSVVUP00000008648 ENSVVUP00000008648 LSM3 LSM3 LSM4 LSM4 PRPF31 PRPF31 PRPF3 PRPF3 LSM6 LSM6 LSM8 LSM8 SNRNP40 SNRNP40 PRPF6 PRPF6 SNRPE SNRPE LSM2 LSM2 ENSVVUP00000022877 ENSVVUP00000022877 SNRPN SNRPN EFTUD2 EFTUD2 SNRPF SNRPF SNRPD3 SNRPD3 SNRPG-2 SNRPG-2 DDX23 DDX23 LSM1 LSM1 LSM5 LSM5 PRPF8 PRPF8 LOC112910823 LOC112910823 SNRPB SNRPB SART1 SART1 SNRNP200 SNRNP200
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (109 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (525 aa)
ENSVVUP00000004662annotation not available (77 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
SNRPE-2Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
ENSVVUP00000008648annotation not available (102 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (112 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (195 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (692 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (117 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (91 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
SNRPESmall nuclear ribonucleoprotein E. (92 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2. (81 aa)
ENSVVUP00000022877annotation not available (117 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
SNRPG-2Small nuclear ribonucleoprotein G. (76 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2360 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (806 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2141 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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