STRINGSTRING
PPIH PPIH SNRPG SNRPG SNRPD2 SNRPD2 PRPF4 PRPF4 SNRPD1 SNRPD1 PRPF31 PRPF31 PRPF3 PRPF3 SNRNP40 SNRNP40 PRPF6 PRPF6 SNRPE SNRPE ENSVVUP00000022877 ENSVVUP00000022877 SNRPN SNRPN EFTUD2 EFTUD2 SNRPF SNRPF SNRPD3 SNRPD3 DDX23 DDX23 PRPF8 PRPF8 LOC112910823 LOC112910823 SNRPB SNRPB SART1 SART1 SNRNP200 SNRNP200
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (112 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (525 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (112 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (692 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
SNRPESmall nuclear ribonucleoprotein E. (92 aa)
ENSVVUP00000022877annotation not available (117 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
SNRPFSmall nuclear ribonucleoprotein F. (295 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (201 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2360 aa)
LOC112910823Small nuclear ribonucleoprotein F. (78 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (806 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2141 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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