STRINGSTRING
ALYREF ALYREF ENSVVUP00000001631 ENSVVUP00000001631 THOC3 THOC3 POLDIP3 POLDIP3 THOC1 THOC1 LOC112925667 LOC112925667 THOC5 THOC5 NCBP2 NCBP2 THOC6 THOC6 NCBP2L NCBP2L PABPC5 PABPC5 THOC7 THOC7 ENSVVUP00000020020 ENSVVUP00000020020 ZC3H11A ZC3H11A SLBP SLBP NCBP1 NCBP1 BCL2L2-PABPN1 BCL2L2-PABPN1 DDX39B DDX39B SARNP SARNP SRRT SRRT ZC3H14 ZC3H14 CHTOP CHTOP THOC2 THOC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALYREFTHO complex subunit 4. (217 aa)
ENSVVUP00000001631annotation not available (311 aa)
THOC3THO complex subunit 3. (101 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (421 aa)
THOC1THO complex subunit 1. (657 aa)
LOC112925667Nuclear RNA export factor 2-like. (726 aa)
THOC5THO complex subunit 5 homolog isoform X2. (700 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
THOC6THO complex subunit 6 homolog. (345 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (141 aa)
PABPC5Polyadenylate-binding protein 5. (382 aa)
THOC7THO complex subunit 7 homolog isoform X1. (152 aa)
ENSVVUP00000020020annotation not available (69 aa)
ZC3H11AZinc finger CCCH domain-containing protein 11A. (815 aa)
SLBPHistone RNA hairpin-binding protein. (545 aa)
NCBP1Nuclear cap-binding protein subunit 1 isoform X1. (790 aa)
BCL2L2-PABPN1Polyadenylate-binding protein 2 isoform X1. (333 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (463 aa)
SARNPSAP domain-containing ribonucleoprotein. (210 aa)
SRRTSerrate RNA effector molecule homolog isoform X3. (875 aa)
ZC3H14Zinc finger CCCH domain-containing protein 14 isoform X2. (702 aa)
CHTOPChromatin target of PRMT1 protein isoform X1. (277 aa)
THOC2THO complex subunit 2 isoform X4. (1592 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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