(10 nodes) Mixed, incl. RBM1CTR, and Nuclear factor hnRNPA1 network (Vulpes vulpes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
	HNRNPK	Heterogeneous nuclear ribonucleoprotein K isoform X1. (464 aa)
	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (344 aa)
	HNRNPA1L2	Heterogeneous nuclear ribonucleoprotein A1-like. (320 aa)
	LOC112928885	Heterogeneous nuclear ribonucleoprotein C-like isoform X1. (305 aa)
	LOC112912661	LOW QUALITY PROTEIN: RNA-binding motif protein, X chromosome-like. (388 aa)
	ENSVVUP00000033795	Heterogeneous nuclear ribonucleoprotein A1-like. (147 aa)
	RBMX	RNA-binding motif protein, X chromosome. (352 aa)
	RBMXL2	RNA-binding motif protein, X-linked-like-2. (88 aa)
	PCBP1	poly(RC)-binding protein 1. (326 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVVUP00000033795	HNRNPA1L2	ENSVVUP00000033795	ENSVVUP00000015623	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein A1-like.	0.902
ENSVVUP00000033795	HNRNPA2B1	ENSVVUP00000033795	ENSVVUP00000000527	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.	0.955
ENSVVUP00000033795	HNRNPC	ENSVVUP00000033795	ENSVVUP00000012758	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.	0.937
ENSVVUP00000033795	HNRNPK	ENSVVUP00000033795	ENSVVUP00000010669	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein K isoform X1.	0.962
ENSVVUP00000033795	LOC112912661	ENSVVUP00000033795	ENSVVUP00000017042	Heterogeneous nuclear ribonucleoprotein A1-like.	LOW QUALITY PROTEIN: RNA-binding motif protein, X chromosome-like.	0.930
ENSVVUP00000033795	LOC112928885	ENSVVUP00000033795	ENSVVUP00000016610	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein C-like isoform X1.	0.937
ENSVVUP00000033795	PCBP1	ENSVVUP00000033795	ENSVVUP00000039348	Heterogeneous nuclear ribonucleoprotein A1-like.	poly(RC)-binding protein 1.	0.937
ENSVVUP00000033795	RBMX	ENSVVUP00000033795	ENSVVUP00000034273	Heterogeneous nuclear ribonucleoprotein A1-like.	RNA-binding motif protein, X chromosome.	0.921
ENSVVUP00000033795	RBMXL2	ENSVVUP00000033795	ENSVVUP00000039218	Heterogeneous nuclear ribonucleoprotein A1-like.	RNA-binding motif protein, X-linked-like-2.	0.927
HNRNPA1L2	ENSVVUP00000033795	ENSVVUP00000015623	ENSVVUP00000033795	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein A1-like.	0.902
HNRNPA1L2	HNRNPA2B1	ENSVVUP00000015623	ENSVVUP00000000527	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.	0.954
HNRNPA1L2	HNRNPC	ENSVVUP00000015623	ENSVVUP00000012758	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.	0.937
HNRNPA1L2	HNRNPK	ENSVVUP00000015623	ENSVVUP00000010669	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein K isoform X1.	0.962
HNRNPA1L2	LOC112912661	ENSVVUP00000015623	ENSVVUP00000017042	Heterogeneous nuclear ribonucleoprotein A1-like.	LOW QUALITY PROTEIN: RNA-binding motif protein, X chromosome-like.	0.933
HNRNPA1L2	LOC112928885	ENSVVUP00000015623	ENSVVUP00000016610	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein C-like isoform X1.	0.937
HNRNPA1L2	PCBP1	ENSVVUP00000015623	ENSVVUP00000039348	Heterogeneous nuclear ribonucleoprotein A1-like.	poly(RC)-binding protein 1.	0.937
HNRNPA1L2	RBMX	ENSVVUP00000015623	ENSVVUP00000034273	Heterogeneous nuclear ribonucleoprotein A1-like.	RNA-binding motif protein, X chromosome.	0.921
HNRNPA1L2	RBMXL2	ENSVVUP00000015623	ENSVVUP00000039218	Heterogeneous nuclear ribonucleoprotein A1-like.	RNA-binding motif protein, X-linked-like-2.	0.927
HNRNPA2B1	ENSVVUP00000033795	ENSVVUP00000000527	ENSVVUP00000033795	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.	Heterogeneous nuclear ribonucleoprotein A1-like.	0.955
HNRNPA2B1	HNRNPA1L2	ENSVVUP00000000527	ENSVVUP00000015623	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.	Heterogeneous nuclear ribonucleoprotein A1-like.	0.954