13 items (Vulpes vulpes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	RPL23	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPL8	60S ribosomal protein L8. (257 aa)
	RPL14	60S ribosomal protein L14. (209 aa)
	ENSVVUP00000007638	annotation not available (213 aa)
	ENSVVUP00000010066	annotation not available (141 aa)
	RPL3	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
	RPL9	60S ribosomal protein L9. (207 aa)
	RPLP2	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	RPL5	60S ribosomal protein L5. (296 aa)
	RPL11	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (196 aa)
	RPL26	60S ribosomal protein L26. (145 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVVUP00000007638	ENSVVUP00000010066	ENSVVUP00000007638	ENSVVUP00000010066	annotation not available	annotation not available	0.996
ENSVVUP00000007638	RPL11	ENSVVUP00000007638	ENSVVUP00000037618	annotation not available	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.994
ENSVVUP00000007638	RPL14	ENSVVUP00000007638	ENSVVUP00000007271	annotation not available	60S ribosomal protein L14.	0.995
ENSVVUP00000007638	RPL15	ENSVVUP00000007638	ENSVVUP00000039618	annotation not available	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.995
ENSVVUP00000007638	RPL19	ENSVVUP00000007638	ENSVVUP00000002439	annotation not available	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.998
ENSVVUP00000007638	RPL23	ENSVVUP00000007638	ENSVVUP00000002714	annotation not available	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.994
ENSVVUP00000007638	RPL26	ENSVVUP00000007638	ENSVVUP00000039574	annotation not available	60S ribosomal protein L26.	0.992
ENSVVUP00000007638	RPL3	ENSVVUP00000007638	ENSVVUP00000019705	annotation not available	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.996
ENSVVUP00000007638	RPL5	ENSVVUP00000007638	ENSVVUP00000028509	annotation not available	60S ribosomal protein L5.	0.998
ENSVVUP00000007638	RPL8	ENSVVUP00000007638	ENSVVUP00000007244	annotation not available	60S ribosomal protein L8.	0.996
ENSVVUP00000007638	RPL9	ENSVVUP00000007638	ENSVVUP00000019839	annotation not available	60S ribosomal protein L9.	0.995
ENSVVUP00000007638	RPLP2	ENSVVUP00000007638	ENSVVUP00000026049	annotation not available	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.978
ENSVVUP00000010066	ENSVVUP00000007638	ENSVVUP00000010066	ENSVVUP00000007638	annotation not available	annotation not available	0.996
ENSVVUP00000010066	RPL11	ENSVVUP00000010066	ENSVVUP00000037618	annotation not available	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.996
ENSVVUP00000010066	RPL14	ENSVVUP00000010066	ENSVVUP00000007271	annotation not available	60S ribosomal protein L14.	0.996
ENSVVUP00000010066	RPL15	ENSVVUP00000010066	ENSVVUP00000039618	annotation not available	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.997
ENSVVUP00000010066	RPL19	ENSVVUP00000010066	ENSVVUP00000002439	annotation not available	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
ENSVVUP00000010066	RPL23	ENSVVUP00000010066	ENSVVUP00000002714	annotation not available	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.996
ENSVVUP00000010066	RPL26	ENSVVUP00000010066	ENSVVUP00000039574	annotation not available	60S ribosomal protein L26.	0.996
ENSVVUP00000010066	RPL3	ENSVVUP00000010066	ENSVVUP00000019705	annotation not available	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.990