STRINGSTRING
MCM3 MCM3 GINS4 GINS4 GINS2 GINS2 ENSVVUP00000000565 ENSVVUP00000000565 CLSPN CLSPN CDC6 CDC6 XRCC3 XRCC3 ENSVVUP00000001281 ENSVVUP00000001281 DBF4 DBF4 ORC6 ORC6 NBN NBN ENSVVUP00000002949 ENSVVUP00000002949 RAD54B RAD54B POLE3 POLE3 CDT1 CDT1 RAD51B RAD51B RBBP8 RBBP8 POLE4 POLE4 MYRF-2 MYRF-2 ORC1 ORC1 EME1 EME1 MLH3 MLH3 MGMT MGMT MCM10 MCM10 MSH2 MSH2 TOPBP1 TOPBP1 MSH6 MSH6 ZRANB3 ZRANB3 BLM BLM POLE POLE REV3L REV3L LOC112926201 LOC112926201 RAD17 RAD17 FBH1 FBH1 MCM6 MCM6 RAD54L RAD54L XRCC2 XRCC2 MLH1 MLH1 RMI1 RMI1 POLD2 POLD2 TM4SF19 TM4SF19 PRIM2 PRIM2 BARD1 BARD1 TP53BP1 TP53BP1 MEIOB MEIOB ORC3 ORC3 RAD9A RAD9A POLD4 POLD4 ORC4 ORC4 MCMBP MCMBP RECQL5 RECQL5 MRE11 MRE11 ANKRD12 ANKRD12 ATAD5 ATAD5 RPA2 RPA2 CHTF18 CHTF18 POLA1 POLA1 RAD51C RAD51C RFC5 RFC5 RFC4 RFC4 TIPIN TIPIN ORC5 ORC5 RFC1 RFC1 GEN1 GEN1 POLI POLI RTEL1 RTEL1 PMS2 PMS2 ATM ATM MCM9 MCM9 DSCC1 DSCC1 RPA3 RPA3 SLX4 SLX4 RAD9B RAD9B MCM4 MCM4 ENSVVUP00000024478 ENSVVUP00000024478 RHNO1 RHNO1 BRIP1 BRIP1 MCM2 MCM2 MCMDC2 MCMDC2 ORC2 ORC2 WRN WRN POLD1 POLD1 TOP3B TOP3B DNA2 DNA2 RAD52 RAD52 RAD51D RAD51D CDC7 CDC7 PRIM1 PRIM1 MSH5 MSH5 TIMELESS TIMELESS RPA1 RPA1 LOC112913400 LOC112913400 SLF1 SLF1 RAD1 RAD1 GINS1 GINS1 DMC1 DMC1 MCM7 MCM7 MCM8 MCM8 MCM5 MCM5 GINS3 GINS3 BRCA1 BRCA1 ATR ATR PCNA PCNA POLD3 POLD3 RAD50 RAD50 RFC2 RFC2 MSH3 MSH3 POLK POLK CDC45 CDC45 CHEK2 CHEK2 SLX1A SLX1A EXO1 EXO1 BRCA2 BRCA2 RFC3 RFC3 RAD51 RAD51 MUS81 MUS81 PMS1 PMS1 POLA2 POLA2 MAD2L2 MAD2L2 REV1 REV1 POLH POLH TDRD3 TDRD3 HUS1 HUS1 MCPH1 MCPH1 WDHD1 WDHD1 ATRIP ATRIP POLE2 POLE2 MSH4 MSH4 TOP3A TOP3A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MCM3DNA helicase; Belongs to the MCM family. (825 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (253 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
ENSVVUP00000000565annotation not available (253 aa)
CLSPNClaspin isoform X2. (667 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (516 aa)
XRCC3DNA repair protein XRCC3. (349 aa)
ENSVVUP00000001281annotation not available (486 aa)
DBF4Activator of S phase kinase. (79 aa)
ORC6Origin recognition complex subunit 6. (392 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (792 aa)
ENSVVUP00000002949annotation not available (75 aa)
RAD54BDNA repair and recombination protein RAD54B isoform X3. (113 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (306 aa)
CDT1DNA replication factor Cdt1. (512 aa)
RAD51BDNA repair protein RAD51 homolog 2 isoform X3. (271 aa)
RBBP8DNA endonuclease RBBP8. (900 aa)
POLE4DNA polymerase epsilon subunit 4. (118 aa)
MYRF-2Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (863 aa)
EME1Crossover junction endonuclease EME1. (579 aa)
MLH3DNA mismatch repair protein Mlh3 isoform X1. (1456 aa)
MGMTmethylated-DNA--protein-cysteine methyltransferase. (237 aa)
MCM10Protein MCM10 homolog. (875 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (852 aa)
TOPBP1DNA topoisomerase 2-binding protein 1 isoform X2. (1512 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1361 aa)
ZRANB3DNA annealing helicase and endonuclease ZRANB3. (1082 aa)
BLMBloom syndrome protein. (1420 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2279 aa)
REV3LDNA polymerase zeta catalytic subunit isoform X2. (3138 aa)
LOC112926201LOW QUALITY PROTEIN: replication factor C subunit 5-like. (304 aa)
RAD17Cell cycle checkpoint protein RAD17 isoform X1. (680 aa)
FBH1F-box DNA helicase 1. (1163 aa)
MCM6DNA helicase; Belongs to the MCM family. (821 aa)
RAD54LDNA repair and recombination protein RAD54-like. (747 aa)
XRCC2DNA repair protein XRCC2. (279 aa)
MLH1DNA mismatch repair protein Mlh1 isoform X1. (759 aa)
RMI1recQ-mediated genome instability protein 1. (649 aa)
POLD2DNA polymerase delta subunit 2. (469 aa)
TM4SF19Transmembrane 4 L6 family member 19. (209 aa)
PRIM2DNA primase large subunit. (469 aa)
BARD1BRCA1-associated RING domain protein 1. (719 aa)
TP53BP1TP53-binding protein 1 isoform X1. (1976 aa)
MEIOBMeiosis-specific with OB domain-containing protein. (471 aa)
ORC3Origin recognition complex subunit 3 isoform X1. (772 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (397 aa)
POLD4DNA polymerase delta subunit 4. (107 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (436 aa)
MCMBPMini-chromosome maintenance complex-binding protein isoform X2. (635 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (989 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
ANKRD12Ankyrin repeat domain-containing protein 12 isoform X1. (2061 aa)
ATAD5ATPase family AAA domain-containing protein 5. (1882 aa)
RPA2Replication protein A 32 kDa subunit isoform X2. (269 aa)
CHTF18Chromosome transmission fidelity protein 18 homolog. (1099 aa)
POLA1DNA polymerase. (1467 aa)
RAD51CDNA repair protein RAD51 homolog 3 isoform X1. (382 aa)
RFC5Replication factor C subunit 5. (331 aa)
RFC4Replication factor C subunit 4. (424 aa)
TIPINTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (265 aa)
ORC5Origin recognition complex subunit 5. (435 aa)
RFC1Replication factor C subunit 1. (1166 aa)
GEN1Flap endonuclease GEN homolog 1. (906 aa)
POLIDNA polymerase iota isoform X3. (704 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1232 aa)
PMS2Mismatch repair endonuclease PMS2 isoform X1. (995 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3060 aa)
MCM9DNA helicase MCM9 isoform X1; Belongs to the MCM family. (1141 aa)
DSCC1Sister chromatid cohesion protein DCC1 isoform X1. (422 aa)
RPA3Replication protein A 14 kDa subunit. (245 aa)
SLX4Structure-specific endonuclease subunit SLX4. (1743 aa)
RAD9BCell cycle checkpoint control protein RAD9B. (421 aa)
MCM4DNA helicase; Belongs to the MCM family. (865 aa)
ENSVVUP00000024478annotation not available (157 aa)
RHNO1RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (255 aa)
BRIP1Fanconi anemia group J protein. (1272 aa)
MCM2DNA helicase; Belongs to the MCM family. (903 aa)
MCMDC2Minichromosome maintenance domain-containing protein 2. (681 aa)
ORC2Origin recognition complex subunit 2. (574 aa)
WRNWerner syndrome ATP-dependent helicase. (1455 aa)
POLD1DNA polymerase. (1107 aa)
TOP3BDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (863 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (1054 aa)
RAD52DNA repair protein RAD52 homolog. (758 aa)
RAD51DDNA repair protein RAD51 homolog 4 isoform X1. (328 aa)
CDC7Cell division cycle 7-related protein kinase. (576 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (418 aa)
MSH5mutS protein homolog 5. (846 aa)
TIMELESSProtein timeless homolog isoform X1. (1248 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
LOC112913400Protein DBF4 homolog A. (629 aa)
SLF1SMC5-SMC6 complex localization factor protein 1. (1059 aa)
RAD1Cell cycle checkpoint protein RAD1. (281 aa)
GINS1DNA replication complex GINS protein PSF1 isoform X2. (224 aa)
DMC1Meiotic recombination protein DMC1/LIM15 homolog; Belongs to the RecA family. (333 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (653 aa)
MCM8DNA helicase MCM8; Belongs to the MCM family. (868 aa)
MCM5DNA helicase; Belongs to the MCM family. (763 aa)
GINS3DNA replication complex GINS protein PSF3. (228 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1891 aa)
ATRSerine/threonine-protein kinase ATR isoform X2; Belongs to the PI3/PI4-kinase family. (2637 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
POLD3DNA polymerase delta subunit 3 isoform X1. (466 aa)
RAD50DNA repair protein RAD50 isoform X1. (1312 aa)
RFC2Replication factor C subunit 2 isoform X1. (496 aa)
MSH3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1113 aa)
POLKDNA polymerase kappa isoform X1. (861 aa)
CDC45Cell division control protein 45 homolog. (569 aa)
CHEK2Serine/threonine-protein kinase Chk2 isoform X1. (544 aa)
SLX1ASLX1 homolog A, structure-specific endonuclease subunit. (161 aa)
EXO1Exonuclease 1. (844 aa)
BRCA2Breast cancer type 2 susceptibility protein. (3446 aa)
RFC3Replication factor C subunit 3 isoform X1. (355 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (348 aa)
MUS81Crossover junction endonuclease MUS81 isoform X2. (697 aa)
PMS1PMS1 protein homolog 1 isoform X1. (930 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (586 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
REV1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1254 aa)
POLHDNA polymerase eta isoform X1. (709 aa)
TDRD3Tudor domain-containing protein 3 isoform X3. (799 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (297 aa)
MCPH1Microcephalin. (829 aa)
WDHD1WD repeat and HMG-box DNA-binding protein 1. (1116 aa)
ATRIPATR-interacting protein isoform X2. (792 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (531 aa)
MSH4DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (813 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (987 aa)
Your Current Organism:
Vulpes vulpes
NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox
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