(10 nodes) Nonhomologous end joining complex, and Permease family network (Vulpes vulpes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	XRCC6	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6. (593 aa)
	DCLRE1C	Protein artemis isoform X2. (654 aa)
	XRCC5	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (799 aa)
	RBPMS2	RNA-binding protein with multiple splicing 2. (244 aa)
	PRKDC	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family. (4136 aa)
	ENSVVUP00000024782	annotation not available (252 aa)
	XRCC4	DNA repair protein XRCC4 isoform X2. (367 aa)
	CNPPD1	Protein CNPPD1 isoform X2. (411 aa)
	SLC23A3	Solute carrier family 23 member 3 isoform X1. (652 aa)
	ENSVVUP00000040346	annotation not available (213 aa)

Your Current Organism:

Vulpes vulpes

NCBI taxonomy Id: 9627
Other names: Canis vulpes, V. vulpes, red fox, silver fox

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNPPD1	ENSVVUP00000024782	ENSVVUP00000035878	ENSVVUP00000024782	Protein CNPPD1 isoform X2.	annotation not available	0.555
CNPPD1	ENSVVUP00000040346	ENSVVUP00000035878	ENSVVUP00000040346	Protein CNPPD1 isoform X2.	annotation not available	0.555
CNPPD1	PRKDC	ENSVVUP00000035878	ENSVVUP00000022479	Protein CNPPD1 isoform X2.	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.500
CNPPD1	XRCC5	ENSVVUP00000035878	ENSVVUP00000012044	Protein CNPPD1 isoform X2.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.817
CNPPD1	XRCC6	ENSVVUP00000035878	ENSVVUP00000004450	Protein CNPPD1 isoform X2.	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	0.555
DCLRE1C	ENSVVUP00000024782	ENSVVUP00000006905	ENSVVUP00000024782	Protein artemis isoform X2.	annotation not available	0.863
DCLRE1C	ENSVVUP00000040346	ENSVVUP00000006905	ENSVVUP00000040346	Protein artemis isoform X2.	annotation not available	0.863
DCLRE1C	PRKDC	ENSVVUP00000006905	ENSVVUP00000022479	Protein artemis isoform X2.	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.958
DCLRE1C	XRCC4	ENSVVUP00000006905	ENSVVUP00000032046	Protein artemis isoform X2.	DNA repair protein XRCC4 isoform X2.	0.594
DCLRE1C	XRCC5	ENSVVUP00000006905	ENSVVUP00000012044	Protein artemis isoform X2.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.980
DCLRE1C	XRCC6	ENSVVUP00000006905	ENSVVUP00000004450	Protein artemis isoform X2.	LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6.	0.863
ENSVVUP00000024782	CNPPD1	ENSVVUP00000024782	ENSVVUP00000035878	annotation not available	Protein CNPPD1 isoform X2.	0.555
ENSVVUP00000024782	DCLRE1C	ENSVVUP00000024782	ENSVVUP00000006905	annotation not available	Protein artemis isoform X2.	0.863
ENSVVUP00000024782	PRKDC	ENSVVUP00000024782	ENSVVUP00000022479	annotation not available	DNA-dependent protein kinase catalytic subunit isoform X2; Belongs to the PI3/PI4-kinase family.	0.907
ENSVVUP00000024782	RBPMS2	ENSVVUP00000024782	ENSVVUP00000018750	annotation not available	RNA-binding protein with multiple splicing 2.	0.571
ENSVVUP00000024782	SLC23A3	ENSVVUP00000024782	ENSVVUP00000035885	annotation not available	Solute carrier family 23 member 3 isoform X1.	0.555
ENSVVUP00000024782	XRCC4	ENSVVUP00000024782	ENSVVUP00000032046	annotation not available	DNA repair protein XRCC4 isoform X2.	0.517
ENSVVUP00000024782	XRCC5	ENSVVUP00000024782	ENSVVUP00000012044	annotation not available	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.982
ENSVVUP00000040346	CNPPD1	ENSVVUP00000040346	ENSVVUP00000035878	annotation not available	Protein CNPPD1 isoform X2.	0.555
ENSVVUP00000040346	DCLRE1C	ENSVVUP00000040346	ENSVVUP00000006905	annotation not available	Protein artemis isoform X2.	0.863